KEGG   Burkholderia ambifaria MC40-6: BamMC406_4117
Entry
BamMC406_4117     CDS       T00684                                 
Name
(GenBank) PHP domain protein
  KO
K02347  DNA polymerase (family X)
Organism
bac  Burkholderia ambifaria MC40-6
Brite
KEGG Orthology (KO) [BR:bac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bac03400]
    BamMC406_4117
DNA repair and recombination proteins [BR:bac03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerase
    BamMC406_4117
SSDB
Motif
Pfam: DNA_pol_B_thumb HHH_8 HHH_5 DNA_pol_B_palm PHP
Other DBs
NCBI-ProteinID: ACB66582
UniProt: B1Z302
LinkDB
Position
2:1152851..1154629
AA seq 592 aa
MPIHNAECAAVFAEIADMLEIQGANPFRVRAYRNAARTIAEYGRDIPAMIANGSDLSQIP
SIGADLAAKLREIAATGTCELQQTLRHALPGAIVELLDVPGLGAKRVKALHDALHVDSLE
QLRAEAKSGHVRALPGFGAKTEAHLLDAIDERLQREPQRFLLPDAAQSLRPMLERLRQVA
GVGEAVPAGSFRRCRETVGDLDILVSAQDAAAVADAFVSCGDVVRVLANGKTRSSVMFGN
GLQVDLRVVDADAFGAALVYFTGSKAHNIALRRIAQAGGLKINEYGVFRGDERIAGATEA
SVYEAIGLRWVPPELREGRGEIDASRTGTLPALVERKHLHGDLHAHTDASAGRDSLRAMA
DAARARGLAYLAITDRMPDAGGGRTDCDWLVRQIDEIDRLNASFDDFVLLKGVEAGIRED
GSLDVPDDALGRLDLVVGAVRDGFDLPGDRQTERILRAIDHPYFTILAHPTGRLLGERDA
CELDVPRVLAAAAARRCFVELDGDPRRLDLPDLWCREAAKAGVAVAIGSDARRADDLDNL
DYGIGHARRGWLTRHDVLNTRTLAQLRPLLARTMGGAGSASGASKRDRPKGA
NT seq 1779 nt   +upstreamnt  +downstreamnt
atgccgatccacaatgccgagtgcgcggccgtattcgccgaaatcgccgacatgctcgag
attcagggcgcgaatccgttccgggtgcgcgcctatcgcaacgcggcccgtacgattgcc
gagtacggccgcgacattccggcgatgatcgcgaacggcagcgatctcagtcagattcca
tcgatcggcgccgatctcgcggcgaagctgcgcgagatcgccgcgaccggcacctgcgaa
ctgcagcaaacgctgcgccatgcgttgccgggcgcgatcgtcgaattgctcgacgtgccg
gggctcggcgcgaaacgcgtgaaggcgctgcatgacgcattgcacgtcgactcgctcgaa
cagttgcgcgccgaagcgaagagcgggcacgtgcgcgcgctgccgggcttcggcgcgaag
accgaagcgcatctgctcgacgcgatcgacgagcgtctgcagcgcgagccgcagcgcttc
ctgctgcccgatgccgcgcaatcgctgcggccgatgctcgagcggctgcgccaggtggcc
ggcgtcggcgaggcggtgccggccggcagttttcggcgctgccgcgagacggtcggcgat
ctcgacatcctcgtgagtgcacaagatgcggccgcggtggccgacgcgttcgtcagctgc
ggcgacgtcgtgcgcgtgctcgcgaacggcaagacgcgttcgagcgtgatgttcggcaac
gggctgcaggtcgacctgcgcgtcgtcgacgccgacgcattcggcgcggcgctagtctat
ttcaccggatcgaaggcgcacaacatcgcgctgcgccggatcgcgcaggccggcggcctg
aagatcaacgaatacggcgtgttccgtggcgacgagcggatcgcgggcgcgacggaggct
tccgtctacgaggcgatcggccttcgctgggtgccgcccgaactgcgcgagggccgcggc
gagatcgacgcgtcgcgcaccggcacgctgcccgcgctggtcgagcgcaagcatcttcat
ggcgatctgcacgcgcataccgacgcgtcggccgggcgcgacagcctgcgagcgatggcg
gatgccgcccgcgcgcgcgggctcgcgtatctggccatcaccgaccgcatgccggatgcc
ggcggcggccgtaccgattgcgactggctcgtgcgacagatcgacgagatcgaccgcctc
aacgcgtcgttcgacgatttcgtgctgttgaagggcgtggaggccggcattcgcgaggac
ggcagcctcgatgtgcccgacgacgcgctcggccggctcgacctcgtcgtcggcgcggtg
cgcgacggcttcgacctgccgggcgacaggcagaccgagcggatcctgcgcgcgatcgat
catccgtatttcacgatcctcgcgcatccgacgggccggctgctcggcgaacgcgacgcc
tgcgaactcgacgtgccgcgcgtgctcgccgcggccgccgcgcgccgctgcttcgtcgaa
ctcgacggcgacccgcggcggctcgatctgccggacctgtggtgccgcgaggccgcgaag
gccggcgtcgcggtggcgatcggctcggacgcccgccgcgcggacgatctcgacaacctc
gactacggtatcggccacgcgcggcgcggctggctcacgcggcacgacgtgctcaacacg
cgcacgctcgcgcaactgcggccgctgctggcgcgcacgatgggtggcgcgggcagcgcg
agcggcgcgtcgaagcgcgaccgcccgaagggcgcgtga

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