Burkholderia ambifaria MC40-6: BamMC406_5158
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Entry
BamMC406_5158 CDS
T00684
Name
(GenBank) Hemolysin-type calcium-binding region
Organism
bac
Burkholderia ambifaria MC40-6
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
HCBP_related
Peptidase_C39_2
EF-hand_5
Motif
Other DBs
NCBI-ProteinID:
ACB67603
UniProt:
B1Z0Q1
LinkDB
All DBs
Position
2:complement(2339047..2343651)
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AA seq
1534 aa
AA seq
DB search
MSKITGREEIFKGLNLGEDVIGLINKSQTLVDQIHKYNKDVLAENVRPIEVDVDRVGIFW
SSIEKGIYLGRYGDAGYEALDPRVFVGILSHELGHYINDARDKAREQFYADKVRDNYDIA
AFVGITKEAEAAYNNWKIAREIYENNRSLISVLGDRPDYVSAPGYDIYHMLTKVYDANVG
KMSADMLEKAMMEVAGSYLAQASPGANLNVNYYEYYGSAYGASPKRLSHAPVAAVDYSVD
FETGLMKSVTLHFSTGMRQTNQYDRGLLSTAALCGPNGQIVEYARYAANGLKTEEIIYDS
IGNGTITRTDTNGDGVFDHVKKETRLADGASVIREDTNGDGVADRNFIVNGGQRYDLSNV
RDAAFADSLLSRYRASGLLSGTSYLDLSQVISRTLTYGGKNDYGFTMPSGWYNPIGAFYE
AKSLELDTAASIANKTPVLLNAQRQGLSAETLRSLDTNRDGKLSGAELNGLQVWVDMNED
GIADAGEFRALHHAGISEIRAVDFDIVTRGNSRYANGPDTAPLKGSEVAGQPGRIYLAPA
VPFSNYRALRDTDNTYWINSSQFIHFGARQIKINNGNRTYLIGTDGNDVFDANYYAAYGH
WINSGLLVNFLAGGGDDVMGGSWRNDNLWGGTGNDTLFGYDGDDRLYGEEGDDELQGGAG
NDVLDGGSGNDSLFGQAGNDIMNGGDGDDIMMGFTASNEAKQALAPGETDDDVMYGGAGN
DRMWGGLGNDYMDGGDGADLVRGGHGNDTIFGGTGNDELHGDEGNDRLLGEAGHDRIFGE
AGDDVIWGGDGDDVLVGFTADNDAKQTLSWGETDNDALYGGNGNDALYGGLGNDYLDGGN
DDDFLDGGEGDDTLFGGAGSDELNGGNGNDVLSGETGNDKIFGGAGNDTIWGGDGDDILV
GFTATNDAKQSLAAWETDDDTIYGGAGNDLILGGLGNDLLYGEAGNDEIQGGAGHDRLYG
GDGNDRLFGQVGNDILYGGAGDDLLVGFTGDNEEKRTLAPGETDDDYLYGGDGRDTLLGG
LGNDYLDGGAGADHMEGGQGNDTYIVNSVNDVILEYANEGYDTVISSANYILNANIEELR
LVEGFDINGTGNALDNVIVGNSADNILDGVTGADTMIGGKGNDTYYVDNVGDRVVERAGE
GIDTVQSKISYALGDHVENLNLLDFGKPEKGLVDGTSVLVYGYPKANELDYMQGDAVPTF
QGTCALTSIANLLTQIGTPTTEGEVVRRAINNQWAITSPAATDYQRGGSNYVQQQALLKS
YGITNNLLAGYDEHAVANLVRSGRGVILALNAGRLWGDGAYLDSGGVNHVVTVTGAVYGE
ADGVLKGFYIADSGRQRVSDMTRYVSLQEFRSAANVPNSYAIYTAEALKLWNEDIDGTGN
ALDNTIIGNRGNNVLDGGAGNDILVGGLGNDTYRFGRGAGRDTIQDDDETLGNNDVISIG
AGVSADQLWFRHVGNDLEISILGSSDTATVRDWYSGSRYQIEQIRLDDGRTLVNADVEKL
VQAMAAWSPPGAGSVTLSPEHQAALAPTLATSWR
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaattacgggaagagaggaaatatttaagggtttgaatttgggcgaggatgtg
attggtttgataaataaaagccaaactctagttgatcagattcataaatataataaagat
gttttggctgagaatgttcggccaattgaggttgatgtcgatagggtagggattttctgg
agctccattgagaaaggtatttatcttgggcgctacggagatgcagggtatgaggcactt
gatccgcgcgtctttgtcggtatattgagtcatgagcttggtcactacattaatgatgcg
cgtgataaagcgagggagcagttttatgcggataaggtgcgggataattacgatattgct
gcttttgtcggaataacaaaggaggcggaggcggcctacaataattggaaaatcgcacgg
gaaatatacgagaataacagatcgttgatctccgtgcttggcgatcgtcccgactatgtg
tcggcgcccggctatgacatctatcacatgcttactaaagtttacgacgcgaacgtcgga
aagatgtcggcggatatgttagaaaaggcaatgatggaggttgccggaagctatcttgct
caggcgagtcccggagcgaatttgaacgtcaactactatgagtattacggatcggcttat
ggtgcgtcaccaaagcgcttgtcccacgctcccgttgctgcagttgattactcggtagat
ttcgagacgggactgatgaagtcagtgacgttgcatttctccaccggcatgcggcagaca
aatcaatatgatcgcgggttgctgagcacagcagcgttatgtggtccaaacggacagatt
gtcgaatatgcgcgatatgcggctaacggcttgaagactgaggaaatcatctacgattcc
atcgggaacggaacgatcacccgaaccgacaccaacggcgatggcgtattcgaccatgtc
aagaaagaaacccgcctcgccgacggcgccagcgtaatccgcgaagacaccaacggcgat
ggcgttgcggaccgcaatttcatcgtgaacggcggccagcgttacgacttgtccaacgtc
cgcgatgccgcctttgccgacagcctgctgtcgcgctatcgtgcctccggcctactgagc
ggcacgagctatctggatctgagccaggtcatttcccggacgctgacctacggcgggaag
aatgattacggcttcacgatgccatccggctggtacaacccgatcggcgcgttctacgaa
gcgaaaagcctcgaactcgacaccgcggcgtcgatcgcgaacaagactccggtgttgctc
aatgcacagcgacaaggtttgagtgctgaaacactgcgctcgctcgataccaaccgcgac
ggcaaattgtccggtgcggaactcaatggcctgcaggtctgggtcgatatgaacgaggac
ggcatcgcggatgccggcgaattccgcgcgctccatcacgcaggtatttccgaaattcgt
gccgtcgatttcgacatcgtaactcgtggcaacagccgatatgcgaacggcccagacacc
gcgccgctcaagggcagcgaggtcgcgggccagccagggcgcatctatctcgccccggct
gttcccttctccaattaccgtgcgctgcgcgacaccgacaacacgtactggatcaattcc
agtcagttcatccacttcggtgcgcgtcagatcaagatcaacaacggcaatcgaacctat
ctcatcggaaccgacggaaacgacgtattcgacgcgaactactacgccgcgtacggccac
tggatcaacagcggtttgctcgtaaacttcctcgccggcggcggtgacgatgtaatgggc
ggcagctggcgcaacgacaatctgtggggcggcaccggcaacgacacgctattcggctac
gacggcgacgatcggttgtacggcgaagaaggcgacgacgagttgcagggtggtgcaggc
aacgacgtgctcgatgggggctccggaaacgattcgctgtttggccaggccggcaacgac
atcatgaacggcggcgatggcgacgacatcatgatgggcttcaccgcatccaacgaagcg
aagcaggcactcgcaccgggagaaacggacgacgacgtcatgtacggtggtgcgggcaac
gatcggatgtggggcggcctcggcaacgactacatggacggcggcgacggtgcagatctc
gtcagaggcggtcacggaaacgacacgatattcggtggtaccggcaacgacgaattgcac
ggcgacgaaggcaacgaccgacttctcggcgaagccggtcacgaccggatattcggtgaa
gcgggcgacgacgtgatctggggcggcgatggtgacgacgtactggtcggctttaccgcc
gacaacgatgcgaagcaaacgttgtcgtggggcgagaccgacaacgacgcgctatacggc
ggaaacggaaacgatgcattgtatggcggtcttggcaacgactacctcgatggcggcaac
gacgacgacttcctcgacggcggagaaggcgacgacacgctctttggcggcgccggcagc
gacgagttgaatggcggtaacggcaacgacgtcctgtcgggggaaaccggcaacgacaag
attttcggcggcgcgggcaatgacacgatctggggcggtgatggtgacgacattctcgtc
ggcttcaccgccaccaatgatgcgaagcagtctctcgccgcatgggaaaccgacgacgac
acgatctacggtggcgccggcaacgacctgattctcggcggcctcggcaacgatctgctc
tatggcgaggcaggcaacgacgaaattcaaggcggagccggccacgaccggctgtacggc
ggagacggcaacgatcgcctgttcggtcaagtcggcaacgacatcctgtatggcggcgcg
ggcgacgatctgctggtcggcttcaccggcgacaacgaggagaagaggacgctggctccg
ggcgagacggacgacgactatctctacggcggagacggcagggatacgctgctcggcggt
ctcgggaacgactatctcgatggcggcgctggtgcggatcacatggaaggcgggcagggt
aacgacacctatatcgtcaacagcgtcaacgacgtgattctcgagtacgcgaatgaaggt
tacgacacggtgatcagcagcgcgaactacatcctcaatgccaacatcgaggaattgcgc
ctcgtcgaaggattcgacatcaacggcacggggaatgcgctcgataacgtgatcgtaggc
aacagcgcggacaacatcctggacggtgtgacgggcgccgacacgatgatcggcggcaag
ggcaatgacacctactacgtcgacaacgttggcgatcgtgtggtggaacgggcgggcgaa
gggatcgatacggttcagagcaaaatcagctacgcgctgggcgaccatgtcgagaacctg
aatctgctcgatttcggcaaaccggaaaagggtctcgtcgatggcacgtccgtactggta
tacggttacccgaaggcgaacgaactggattacatgcagggcgacgcggttccgacgttc
cagggaacgtgcgcgctgacgtcgatcgccaatctgcttacacagatcgggacgccgacc
acggagggggaggtggtcaggcgcgcgatcaacaaccaatgggcgatcaccagcccggcc
gcgaccgactatcagcgaggcggatcgaactacgtccagcaacaggcgctcctgaaaagc
tacggcattacgaacaatctgctcgcgggatacgacgagcatgcggtcgcgaatctggtt
cgaagcggtcggggtgtgattctcgcgctgaacgccggtcggctctggggagatggtgcg
tatctcgacagcggcggcgtcaatcacgtcgttacggtgaccggcgcggtatatggcgag
gcagacggtgtgctcaaaggcttctacattgccgattcggggcgtcaacgcgtcagcgac
atgacccgttacgtgagccttcaggagttcaggtcggcggctaacgtaccgaactcgtat
gcgatttacacggccgaagcgctgaaactgtggaatgaggacatagacggcacgggtaac
gcactcgacaacacgatcatcggcaatcgcggcaacaacgtgctggatggtggtgccggc
aacgacatcctggtcggcggcttgggcaacgatacctatcgatttggccgcggggccggc
cgcgacacgattcaggacgacgacgaaacgctcggcaacaacgatgtcatcagcatcggg
gctggtgtatccgcggatcaattgtggttccgtcacgtcggcaatgatctcgagattagt
atcctcggctccagcgataccgcgacggttcgggactggtactcgggatcgcgctatcag
atcgagcagatccgcctggacgacggtcggacgctcgtcaacgccgatgtcgagaagctg
gtgcaggccatggcggcatggtcgccgccgggtgccgggtcggtcacgctgtctcccgag
catcaggccgcgcttgcgccgacgctggcgacgagctggcgttaa
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