Bacillus sp. BH072: OY17_16365
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Entry
OY17_16365 CDS
T03582
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bacb
Bacillus sp. BH072
Pathway
bacb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bacb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OY17_16365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacb03400
]
OY17_16365
Enzymes [BR:
bacb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
OY17_16365
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OY17_16365
DNA repair and recombination proteins [BR:
bacb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OY17_16365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AJE79614
UniProt:
A0A806QH47
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All DBs
Position
complement(3394089..3394925)
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AA seq
278 aa
AA seq
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MIVPELPEVETVRRTLTGLVKGKTIESAHIRWPNIIKKPAEPEEFARQIAGETIRSIGRR
GKFLLFHLDHYVMVSHLRMEGKYGLHQADEPDDKHVHVVFHMTDGTQLRYRDVRKFGTMH
LFAPGEEQNALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQKAVVGLGNIYVD
EALFRARIHPETKANSLSDGQIKTLHTEIKDTLQEAIDAGGSTVRSYINSQGEIGMFQLK
HYVYGKKDEPCKSCGTMISKIVVGGRGTHFCARCQKKS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgccggaattaccagaagttgaaacggtccggcgcactctgaccggtcttgtg
aaggggaaaacgattgaatcggcgcatatcagatggccgaatatcatcaaaaaacccgcc
gagccggaggaattcgcgcggcagattgcaggagaaacgatccgatccatcggaagaaga
ggaaagtttttgcttttccatctggatcattatgtcatggtgtcccaccttcggatggag
gggaaatacggtcttcatcaggccgatgagcctgacgataaacatgtgcacgtcgtgttt
cacatgacggacggaacacagctccgctaccgggatgtccggaaattcggcacgatgcat
ttgtttgcgccgggagaggaacagaatgcattaccgctttcacagctcgggcccgaaccc
gatgatgaagcatttaccgctgcttatttaaaagagcggcttgcaaaaacgaaccgcgcg
gtgaaaacagccctgctcgaccaaaaagcggtcgtcggcctcggcaatatttatgtcgat
gaagctttattccgggcgcggattcatcctgagacaaaagcgaacagtctgtcagacggg
cagataaaaacgcttcatacagaaattaaagacacccttcaggaagcgattgacgcgggc
gggagcaccgtccggtcttatatcaattctcaaggggaaatcggaatgtttcagctcaaa
cattacgtatacggcaaaaaggatgagccgtgcaagtcgtgcggcacgatgatttctaaa
atcgtggtcggcggaagagggacgcatttttgcgcccgctgccaaaaaaaatcataa
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