Bacillus sp. Y1: DOE78_17720
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Entry
DOE78_17720 CDS
T05922
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bacq
Bacillus sp. Y1
Pathway
bacq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bacq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DOE78_17720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacq03400
]
DOE78_17720
Enzymes [BR:
bacq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DOE78_17720
DNA repair and recombination proteins [BR:
bacq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DOE78_17720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_12
UvrD-helicase
HHH_5
AAA_22
nSTAND3
AAA_16
AAA
UvrD_C
AAA_18
AAA_28
T2SSE
NTPase_1
AAA_17
TsaE
Motif
Other DBs
NCBI-ProteinID:
AYA77126
UniProt:
A0A385NSL6
LinkDB
All DBs
Position
complement(3575653..3578049)
Genome browser
AA seq
798 aa
AA seq
DB search
MEGQETLDLFKDEGRFIKGKHLVTIFHNEQNLYTVLRIRVEETNENYEDKEAVITGYFPK
VHEQETYIFYGELKDHPKFGQQFHATHFRKDIPQTKQGVVSYLSSELFKGVGKKTAEKIV
EVLGENAISKIMQQPTLLDEIPKLPPDKAKEIYDTLMEHQGLEQAMVALNQYGFGPQISM
RIYQAYKDQTVEVVQSNPYKLVEDIQGIGFTRADDLGFQLGISGHHPDRIKAACLYTLEV
ECMQNGHVYMEISLLLDKVKTLLEENKRDEIDFSPIGAEVVKLEEEGKIIVEEMRVYLPS
LFFSEKGLVTSIKKIVSQTQYENQFPDSEFLLALGNLEERLGVQYAPTQKDAIQTALMSP
MLILTGGPGTGKTTVIKGIVELYAELHGCSLDPNDYKGDEPFPFILAAPTGRAAKRMTES
TGLPAVTIHRLLGWNGVEGFSRNEDNPLEGKILIVDETSMLDTWLANQLFKALPESIQVI
LVGDEDQLPSVGPGQVLKDLLECGVLPVVRLTDIYRQAEGSSIIELAHEIKSGRLPANIS
MQQKDRSFFRCNANQIVDVVEKVVRNAKSKGYTAKDIQVLAPMYKGPAGIDRLNTLMQTI
FNPNPDGTRKEIKYGDVTYRVGDKVLQLVNQPENNVFNGDIGEIVSIFYAKENTEKEDMI
VVSFEGAEATYTRQDLQQITHSYCCSVHKSQGSEFPIVILPVVRSYYRMLRRNLLYTAIT
RSKQFLILCGEEEALRVGISRSDEQERLTTLQTKLEKAIASKNESNEKGTLQNAEEHLLS
VDPMIGMEGITPYSFMGS
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
ttggagggacaagaaacgctcgatttgtttaaggatgaaggaagatttataaaaggaaag
catcttgtcacaatctttcataatgaacaaaatttgtacaccgttctaagaattcgcgtg
gaagaaacgaatgagaattatgaagataaagaagctgttattaccggttattttccaaaa
gttcatgaacaggaaacgtacatattttatggagagttaaaggaccatccgaaattcggt
caacaatttcatgcaacgcattttcgaaaggatataccccaaacaaaacaaggggtagtg
agctatttatcaagtgagctttttaaaggagtcggaaagaaaaccgctgaaaaaattgtt
gaagttttaggggaaaatgccatttctaaaattatgcaacaacctactttacttgatgaa
ataccaaagcttcccccggataaagcaaaggaaatttatgatacccttatggagcatcaa
gggctagaacaggcgatggttgctttaaatcaatatggatttggtccgcaaatttctatg
cggatttatcaggcgtataaggaccagacggtagaagtggttcagtcgaatccttataag
cttgttgaagatatccaaggtattggatttaccagagcagatgatcttgggtttcaactt
ggaatttccggtcatcaccctgaccgaataaaagcggcctgcttatatacacttgaggtt
gagtgtatgcaaaatggtcatgtatacatggaaatatcgttattactagataaggttaag
accttattagaagaaaacaaacgtgatgaaattgacttttcacctattggagcagaagta
gttaagcttgaagaagaagggaaaatcatcgttgaagaaatgagggtgtatttgccttcc
ctatttttctccgaaaaaggacttgttacaagcattaaaaaaatcgtctctcaaacacag
tatgaaaatcagtttccggattctgaatttttactcgcccttggaaatctagaggaacga
ttaggagttcagtatgcgccgacacaaaaggatgcgattcagacggctttaatgtcccct
atgctgatcttaacaggtgggccaggtacagggaagacaacggttattaaagggatagtt
gagctatatgctgaattgcatggctgctctttagatccaaatgattataaaggagacgag
ccctttccatttatattagcagcgccaactggtcgtgcagcaaaacgaatgacagaatct
acaggacttcctgcggttaccattcacaggcttttaggatggaatggggttgaagggttt
agcagaaatgaagacaaccccttagaagggaaaattttgattgtagatgagacgtccatg
cttgacacatggcttgctaatcagctttttaaagctttgcctgaatccattcaagtcata
ttggttggggatgaggatcaattaccttctgtaggtccggggcaagtactaaaggatctc
ctagaatgtggcgttcttcccgtcgttaggctcacagatatttatcgccaagcggagggt
tcctctattattgagcttgctcatgaaattaaatctggacgtttaccggccaatataagt
atgcaacaaaaggaccgctccttttttagatgtaacgcaaaccaaattgtggatgtagtt
gagaaggtcgtccgaaatgcaaaaagtaaaggttatacagcaaaagatatacaggttctt
gcaccgatgtataaaggacctgctggaatcgatcgcttgaacacgttaatgcaaacaata
tttaatcccaaccctgatgggacgaggaaagaaataaagtacggtgatgtgacttatcgt
gtcggtgataaagtgttacagcttgtgaatcagccggaaaataatgtgtttaatggcgat
ataggtgaaattgtatccatcttctatgcaaaagaaaatacggaaaaagaggatatgatc
gttgtatcctttgagggtgcggaagctacatataccagacaagaccttcaacaaataacc
cattcctattgctgctctgttcataagtctcaagggagtgaatttcctattgtaatcctc
cctgtagtaagaagctattatcgaatgctgcgaagaaatcttttgtatacagcgattaca
agaagtaaacagtttttgatcctttgtggagaagaagaggctttaagagtcggtatttca
agatcggatgaacaagaaagattgaccaccttacaaacgaaattggaaaaagctattgca
agcaaaaacgagagcaacgaaaagggtacgttacaaaatgcggaggagcacttgctgtct
gtagaccccatgattggcatggaaggaatcactccatatagctttatgggaagttaa
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