Bifidobacterium actinocoloniiforme: AB656_07215
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Entry
AB656_07215 CDS
T04036
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
bact
Bifidobacterium actinocoloniiforme
Pathway
bact00470
D-Amino acid metabolism
bact00550
Peptidoglycan biosynthesis
bact01100
Metabolic pathways
bact01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bact00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AB656_07215
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AB656_07215
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
AB656_07215
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bact01011
]
AB656_07215
Enzymes [BR:
bact01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
AB656_07215
Peptidoglycan biosynthesis and degradation proteins [BR:
bact01011
]
Precursor biosynthesis
Amino acid ligase
AB656_07215
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Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
AKV55960
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Position
1757299..1758492
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AA seq
397 aa
AA seq
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MASKRRVAVLYGGRADEHPISCVSAAGVLNAIDRDRFEPAPIGITRDGVWTVGGEDPRQW
NLGGPELPEVLVRETSRPVLLDIAEGADGFYAGAHEDLEAASRASRPPVLGSGANGRSLE
PLGHIDAVFPVLHGPFGEDGTVQGLLDMMGLPYIGCGVFASSACMDKHFTKILLRAAGIP
VAPGITVDSRTLAGGESIEAAGDELVGLVREANLTYPVFVKPSRAGSSFGVTKVEHENAK
DLARALFEASRHDWRVLIEQGIEAREIECAVLNPVDGEEPWTAWPGEIVLDKPADDAFYD
FDSKYMDAAASHVEVPAKLDEDVLQRVRRTAARAFKAVDGRGLSRVDCFVLPDGQVLVNE
INTMPGFTPISMYPKAWEATGVSYTDLITQLIEGVLQ
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtaagcggcgggtggcggtactgtacggtggccgggcggatgagcaccctatt
tcctgcgtttccgcagccggggtcctcaatgccatagatcgcgaccggttcgagccggcg
ccgattggcatcacccgtgatggcgtgtggaccgtcggtggtgaagacccgcgccagtgg
aacctgggcggccctgagctgcccgaggtgctcgtacgtgagaccagccggccggtcctg
ctcgacatcgccgagggggccgacggcttctatgccggcgcccacgaagaccttgaggcc
gcctcgcgggcttcgcgcccgccggtcctgggttcgggcgcgaatggccggtccctggag
cccctggggcacatcgacgcggtctttcccgtcctgcacggtcccttcggcgaggacggt
acggtccagggtcttctggacatgatgggcctaccgtacatcggttgcggcgtcttcgct
tcgtccgcctgcatggacaagcacttcacgaagatcctgctgcgcgcggcgggcattcct
gtcgcgcccggcatcaccgtggattctcgcaccctggcagggggcgagtccattgaggcg
gccggcgacgagctggtcggcctggtgcgcgaggccaacttgacctaccctgtcttcgtc
aagccttccagggccggctcttccttcggggtgaccaaggtggagcatgagaatgccaag
gacctggcccgggcgctctttgaggcttcgcgccacgactggcgcgtcctgatcgagcag
gggattgaggcccgcgagatcgagtgcgcggtcctgaacccggttgacggcgaagagcca
tggaccgcctggcccggtgagatcgtgcttgacaagcccgccgatgacgcgttctacgac
ttcgacagcaagtacatggatgcggccgcatcgcatgtcgaagtgccggccaagttggat
gaggacgtgctccagcgggtgaggcggacagctgcgcgcgccttcaaggctgtggatggg
cgggggctgagccgggtggactgcttcgtgctgcccgacggccaagtcctggtcaacgag
atcaacaccatgcccggtttcacgccgatttccatgtaccccaaggcgtgggaagccacg
ggcgtctcctacacagacctgattacccaactcatcgagggtgtcctgcaatag
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