Balaenoptera acutorostrata scammoni (minke whale): 103006710
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Entry
103006710 CDS
T03086
Symbol
RXRB
Name
(RefSeq) retinoid X receptor beta
KO
K08525
retinoid X receptor beta
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03320
PPAR signaling pathway
bacu04659
Th17 cell differentiation
bacu04919
Thyroid hormone signaling pathway
bacu04920
Adipocytokine signaling pathway
bacu04928
Parathyroid hormone synthesis, secretion and action
bacu05200
Pathways in cancer
bacu05202
Transcriptional misregulation in cancer
bacu05207
Chemical carcinogenesis - receptor activation
bacu05216
Thyroid cancer
bacu05222
Small cell lung cancer
bacu05223
Non-small cell lung cancer
bacu05226
Gastric cancer
bacu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
103006710 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
103006710 (RXRB)
03320 PPAR signaling pathway
103006710 (RXRB)
04919 Thyroid hormone signaling pathway
103006710 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
103006710 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103006710 (RXRB)
05202 Transcriptional misregulation in cancer
103006710 (RXRB)
05207 Chemical carcinogenesis - receptor activation
103006710 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
103006710 (RXRB)
05216 Thyroid cancer
103006710 (RXRB)
05222 Small cell lung cancer
103006710 (RXRB)
05223 Non-small cell lung cancer
103006710 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
103006710 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bacu03000
]
103006710 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
bacu03310
]
103006710 (RXRB)
Transcription factors [BR:
bacu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
103006710 (RXRB)
Nuclear receptors [BR:
bacu03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
103006710 (RXRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
103006710
NCBI-ProteinID:
XP_007186969
UniProt:
A0A384AIB7
LinkDB
All DBs
Position
Un
AA seq
537 aa
AA seq
DB search
MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAVAAGEQQT
PEPEPGEAGRDGMGDSGLDSRSPDSSSPNPLPQGAAPPSPPGPPLPPSAAASLGGSGAPP
PPPMPPPPLGSPFPVISSSWGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVK
PPVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYS
CRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMP
VDRILEAELAVEQKSDQGVEGPGGTAGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHF
SSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRS
LSRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCK
QKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctgctcgcccgcccttcctcccccagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcgtcccggtggcggcggcgacgg
ccctggctggatcccgcagcagcagcggcggcggcggtggcagccggagaacaacaaacc
ccggagccggagccgggggaggctggacgggacgggatgggcgacagcgggctggactcc
cgaagcccagacagttcctctccaaatccccttccccagggggccgctcccccttctcct
ccggggccacccttacccccttcagcagctgcatcccttggaggctctggggctccaccc
ccacccccgatgccacccccgccactgggctcccccttcccggtcatcagctcttcctgg
gggtcccctggtctgccccctccagctcccccaggattctccgggcctgtcagcagtccc
cagattaactcaacagtgtcgctccctgggggtgggtctggcccccctgaagatgtgaag
ccaccagtcttaggggtccggggcctgcactgtccaccccctccaggtggccctggggct
ggcaaacgtctatgtgcaatctgcggggaccgaagctcaggcaaacactacggggtttac
agctgtgagggctgcaaaggcttcttcaagcgcaccatccgtaaggacctgacctactcg
tgccgggacaacaaggactgcacggtggacaagcgccagcggaaccgctgtcagtactgc
cgctatcagaagtgcctggccaccggcatgaagagggaggcggtacaggaggagcgtcag
cggggaaaggacaaggatggggatggggagggggctgggggagcccccgaggagatgccc
gtggacaggatcctggaggcagagcttgctgtggagcagaagagtgaccagggcgttgag
ggtcctgggggaaccgcgggtagcggcagcagcccaaatgaccctgtgactaacatctgc
caggcagctgacaaacagctcttcacacttgttgagtgggcaaagaggatcccacacttt
tcctccttgcctctggatgaccaggtcatactgctacgggcaggctggaacgagctcctc
attgcctccttctctcaccgatccatcgatgtccgagacggcatcctcctcgccacaggt
cttcacgtgcaccgcaactcagcccattctgcaggcgtgggagccatctttgatcggtcc
ctctccagggtgctgacagagctagtgtccaaaatgcgtgacatgaggatggacaagaca
gaacttggctgcctgagggcaatcattctgttcaatccagatgccaagggcctctccaac
cccagcgaggtagaggtcctgcgggagaaagtgtacgcgtccctggagacctattgcaaa
cagaagtaccctgagcagcagggccggtttgccaagctgctcttgcgtcttcctgctctc
aggtccataggccttaagtgtctagagcatctgtttttcttcaagctcattggtgacacc
cccatcgacactttcctcatggagatgcttgaggctccccaccagctggcctga
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