Balaenoptera acutorostrata scammoni (minke whale): 103007209
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Entry
103007209 CDS
T03086
Symbol
BARD1
Name
(RefSeq) BRCA1 associated RING domain 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103007209 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacu03019
]
103007209 (BARD1)
04121 Ubiquitin system [BR:
bacu04121
]
103007209 (BARD1)
03036 Chromosome and associated proteins [BR:
bacu03036
]
103007209 (BARD1)
03400 DNA repair and recombination proteins [BR:
bacu03400
]
103007209 (BARD1)
Messenger RNA biogenesis [BR:
bacu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
103007209 (BARD1)
Ubiquitin system [BR:
bacu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
103007209 (BARD1)
Chromosome and associated proteins [BR:
bacu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
103007209 (BARD1)
DNA repair and recombination proteins [BR:
bacu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
103007209 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_2
Ank_4
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4
RTT107_BRCT_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
103007209
NCBI-ProteinID:
XP_007187934
UniProt:
A0A384AL56
LinkDB
All DBs
Position
Un
AA seq
775 aa
AA seq
DB search
MRGNRQPRIRSGNEPHPAPAMEPAGRGAWAHSRAALYRLEKLLRCSRCTNILREPVCLGG
CEHIFCSNCVSDCIGTACPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHGTDFSDLKE
ETSRKSLFSDAEYKKNSIKMWFSPRSKKVRYVVSKVSVQTQPPVISDENAQQASMYEFVS
TSPPVDVSERAKKASAKSGKKQKKKTLAEINQKWNLEAEKEDGKLDSKEEFKKKLVSFYS
QPSVIASPQINGKIDLLASGSVTESECFGSLTEVSLPLAEQIESPEIESRXXXXXXXXLC
ENDLTSKKSLPSGHSGKHGHRNRRSSPVSKRCRSSSPSTSGNSIKQTVLSKNVPLPGCSS
PPSKKLTVGDTLRRKSSNILDESISLSPGTPPSTLNSPSYRRMMCSPSAVKLSPSSLMAM
KRNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQ
HKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDSENMKLL
LLLPEKNESSSTSHCSVVNTGQRRDGPLVLIGSGLSSEQQKMLSELAAILKAKKCAEFDS
TVTHVIVPGDTVQSTLKCMLGILSGCWILKFEWVKACLQRKECEQEEKYEIPEGPHRSRL
NREQLLPKLFDGCYFYFGGTFKHHPKDNLIKLVTAAGGQILSRKPKPDSDVTQTINTVAY
HAKPDSDQHFCTQYIIYEDLSNHRPERVRQGKVWMASSSWFIDCVMSFELLPLDG
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgcgggggaaccggcagccgaggatccgctccgggaacgagcctcatcccgcgcccgcc
atggagccggcaggtcgtggggcctgggcccacagccgcgccgcgctgtaccggctggag
aagctgctgcgctgctcgcgttgcactaatattctgagggagcctgtgtgtttaggaggg
tgtgagcacatcttctgtagtaattgtgtaagtgactgcattggaaccgcatgtccagtg
tgttacaccccagcctggatacaagatgtgaagataaatagacagttggacagcatgatc
cagctttgcagtaagcttcgaaatttgctacatggcactgatttttcagatttgaaagaa
gaaacatctaggaaaagtttatttagtgatgcagaatataagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaggtcaggtatgttgtgagtaaagtttcagtgcaaact
cagcctcctgtgataagcgatgaaaatgctcagcaggcctccatgtatgaatttgtctct
acaagccctccagtggatgtttctgagagggctaagaaggcttccgcaaaatctggaaaa
aaacagaaaaagaaaactttggctgaaatcaaccaaaaatggaatttagaggcagaaaaa
gaagatggtaaacttgactccaaagaggaatttaagaaaaagctagtatccttctatagc
caaccatctgttattgctagtccgcagataaatggtaaaatagacttactagcaagtggc
tccgtaacagaatctgaatgttttggaagcttaactgaagtctctttaccattggctgag
caaatagagtctccagaaattgagagcaggnnaannnnnnnnnnnnnnnnnnntctctgt
gaaaacgatcttacatctaagaaatccttgccatcaggtcatagtgggaaacatgggcat
cgcaacagacgttccagtcctgtttctaagagatgtagaagcagcagtccgagcaccagt
ggaaattcaattaagcaaacagtgctctcaaaaaacgtgccattgcctggatgttcttca
ccaccttcaaagaaacttacagttggtgacacactgaggaggaaaagcagtaatatatta
gatgaatccattagcctctcaccaggtacgcccccttctacactgaatagtccaagttac
agacgaatgatgtgtagtccctcagcagtgaagctctcgcccagtagtcttatggctatg
aaaagaaatcatcgaggagagactttgctccatattgcttcaattaagggcgacatacct
tctgttgaatacctcttacaaaatggaagtgacccgaatgttaaagaccatgctggatgg
acaccattgcacgaagcctgcaatcacgggcacctgaaggtggtggaattgctgctccag
cacaaggcgttggtgaacaccactgggtatcagaacgactcacctcttcacgacgcagcc
aagaacgggcacgtggatatagtcaagctgttactctcctatggagcctccaggaacgcc
gttaacatatttggtctgcggcctgtggattatacagacagtgaaaatatgaaattgctg
ttgctgctaccagagaagaatgaatcatcatcaactagccattgttcagtagtaaacact
ggtcagcgcagggatgggcctcttgtacttataggcagtggactttcttcagaacaacag
aaaatgctcagtgagcttgcagcaattcttaaggctaaaaaatgtgctgagtttgactca
acagtaactcacgtcattgttcctggtgatacagttcaaagcaccctgaaatgtatgctt
gggattctcagtggttgctggatcctaaaatttgaatgggtgaaagcatgtctacaaaga
aaagaatgtgaacaggaagaaaagtatgaaattcctgaaggaccacatagaagcaggctc
aacagagaacagctgttgccaaagctgtttgatggatgctatttctattttgggggaacc
ttcaaacaccatccaaaggacaaccttattaagcttgtcactgcagctgggggacagatc
ctcagtagaaagcccaagccagacagtgacgtgactcaaaccatcaatacagtcgcgtac
catgccaaacctgattctgatcagcacttctgcacacagtatatcatctatgaggatttg
tctaatcatcgcccagagagagttaggcagggcaaagtctggatggcttcttccagctgg
tttatagattgtgtgatgtcctttgagttgctccctcttgacggctga
DBGET
integrated database retrieval system
