Balaenoptera acutorostrata scammoni (minke whale): 103007949
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Entry
103007949 CDS
T03086
Symbol
CPSF6
Name
(RefSeq) cleavage and polyadenylation specific factor 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03015
mRNA surveillance pathway
bacu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103007949 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103007949 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacu03019
]
103007949 (CPSF6)
Messenger RNA biogenesis [BR:
bacu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
103007949 (CPSF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
103007949
NCBI-ProteinID:
XP_007195134
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All DBs
Position
Un
AA seq
644 aa
AA seq
DB search
MEGRIHGPLYPARSASCAPLLVFATGFGVAPSPSSPHTLGRRLRGGHVCNKSFDFRTHGS
CLKKWEQKSIISVSQEAEYGGHDQIDLYDDVISPSANNGDAPEDQDYMDTLPPTVGDDVG
KGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKG
FALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQMSGEGK
AGPPGGSSRAAFPQGGRGRARFPGAVPGGDRFPGPAGPGGPPPPFPGNLIKHLVKGTRPL
FLETRIPWHMGHSIEEIPIFGLKAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPN
RGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPP
GPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPP
PYDRGDYGPPGREMDTARTPLSEAEFEEIMNRNRAISSSAISRAVSDASAGDYGSAIETL
VTAISLIKQSKVSADDHCKVLISSLQDCLHGIESKSYGSGSRRRERSRERDHSRSREKSR
RHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDREREYRHR
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccgcattcacggccctttgtatcccgcgcgctctgcttcctgcgctcccctg
ctcgtgtttgcgacaggtttcggcgtggcgccttctccctcctcccctcacactctggga
aggcggcttcgtggcgggcacgtttgcaacaagtcctttgactttcggacccatggatcg
tgtttaaaaaagtgggaacagaaaagcattatttctgtatctcaggaagctgaatatggt
gggcatgatcagatagatttgtatgatgatgtcatctctccatctgcaaataatggagat
gccccagaagatcaggattacatggatactctcccaccaactgttggtgatgatgtgggt
aaaggagcagcaccaaatgttgtctatacatatactggaaagagaattgcattatatatt
ggaaatctaacatggtggacaacagatgaagacttaactgaagcagttcattctttggga
gtaaatgatattttggagataaaattttttgaaaatcgggcaaatggccagtcaaagggg
tttgcccttgttggtgttggatctgaagcatcctcaaaaaagttaatggatctgttgcct
aaaagagaacttcatggtcagaatcctgttgtaactccatgcaataaacagttcctgagt
caatttgaaatgcagtccaggaaaactacacagtcaggacaaatgtctggggaaggtaaa
gctggtcctccgggaggcagttcacgtgcagcctttccacaaggtggtagaggacgggcc
cgttttccaggggctgttcctggtggggacagatttcctgggccagcaggaccaggaggg
ccacctccaccttttccaggaaatttgatcaagcatcttgttaaaggaactcggcctttg
ttcctggaaactaggattccatggcatatggggcacagcatagaggaaatacccattttt
ggcctaaaagctggacagactccaccacgtccacccttaggtcctccaggaccacccggt
ccaccaggtcctccacctcctggtcaggttctgcctcctcctttagctgggcctcctaat
cgaggagatcgccctccaccaccagttctttttcctggacaaccttttgggcagcctcca
ttgggtccgcttcctcctggtcctccacctccagttccaggctacggcccccctcctggt
ccaccacctccacaacaaggaccacctccacctccaggcccctttccacctcgcccacct
ggccctcttgggccaccccttacactcgctcctccgccgcatcttcctggaccacctcca
ggtgccccaccaccagctccacatgtgaaccccgctttctttcctccaccaactaacagc
ggcatgcctacatcagatagccggggtccaccaccaacggacccatatggccggcctcca
ccatatgataggggtgactatgggcctcctggaagggaaatggatactgcaagaacacca
ttgagtgaagctgagtttgaagaaatcatgaatagaaacagggcaatctcaagcagtgct
atttcaagagctgtgtctgatgccagtgctggtgattatgggagtgctattgagacattg
gtaactgcaatttctttaattaaacaatccaaagtatctgctgatgatcattgcaaagtt
cttattagctctttgcaagattgccttcatggaattgaatccaagtcttacggttctgga
tcaagaagacgtgaacgatcaagagaaagggatcatagtagatcacgagaaaagagtcgg
cgtcataaatcccgcagtagagatcgtcatgatgattattacagagagagaagcagagaa
cgagagagacaccgggaccgggaccgggaccgtgatcgagagcgcgaccgagagcgcgag
tatcgtcatcgttag
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