Balaenoptera acutorostrata scammoni (minke whale): 103015368
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Entry
103015368 CDS
T03086
Symbol
NR1D2
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
103015368 (NR1D2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bacu03000
]
103015368 (NR1D2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
bacu03310
]
103015368 (NR1D2)
Transcription factors [BR:
bacu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
103015368 (NR1D2)
Nuclear receptors [BR:
bacu03310
]
1. Thyroid hormone like
1D. Rev-Erb
103015368 (NR1D2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
LpxD
Motif
Other DBs
NCBI-GeneID:
103015368
NCBI-ProteinID:
XP_007173934
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All DBs
Position
Un
AA seq
646 aa
AA seq
DB search
MSERGAQIQHTGVSELLDWMKSPRRCRRRRCGQCPQGARRSEVCGGESGPAGRSGAGPAR
GLKSGSTRRYPAVLGGVIAYISSSSSASSPASCHSEGSENSFQSSSSSVPSSPTSTNSDN
NGNPKNGDLSNIEGILKNDRIDCSMKTSKSSAPGMTKSHSAVTKFSGMVLLCKVCGDVAS
GFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFKKCLSVGMSR
DAVRFGRIPKREKQRMLIEMQSAMKTMMNSQFNGHLQNDPSVEHQEQTALPAQEQLRPKP
QLEQENIKSSAPSSDFAKEEVIGMVTRAHKDTFMYNQEQRENSAETAQPPREQIPKSVEQ
YNLNDDRCGSGLSSHFPCSESQQHLGAQYRGRSAMPYANGRAVCVTNGHCVNFSNAYAQR
VCDRMSVDGCSRNENKNSYLCSAGGRMHLVCPMNKSPYVDPHKSGHEIWEEFSMSFTPAV
KEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDD
LHSMGAGDLLNSMFEFSEKLNALRLSGEEMSLFTAVVLVSADRSGIENVNSVEALQETLI
RALRTLIMKNHPNEASIFTKLLLKLPDLRSLNNMHSEELLAFKVHP
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagcgtggagctcagattcagcacacaggtgtgtctgagctcttggactggatg
aagtcaccgaggaggtgtagaaggaggagatgtgggcagtgtccgcaaggagcccggcgt
tctgaggtctgtggcggggagagcggacctgcggggcggtctggggctggcccagcccga
ggcctgaaaagcgggtctactcggcgctacccggcggtcctaggaggtgttattgcctac
atcagttcttccagctcagcctctagccctgcctcttgtcacagtgagggctccgagaac
agtttccagtcctcctcctcctctgtcccatcttctccaactagcactaattctgataac
aacgggaatcccaaaaatggcgatctctccaatattgaaggcatcctgaagaatgatcgg
atagattgttctatgaaaacaagcaaatcgagtgcacctgggatgacgaagagtcacagt
gcagtgacaaagtttagtggcatggttctactgtgtaaagtctgtggggatgtggcgtca
ggattccactatggagttcatgcttgtgaaggctgtaagggctttttccggaggagcatt
cagcaaaacattcagtacaagaagtgcctgaagaatgaaaactgctctataatgagaatg
aataggaacagatgtcagcagtgtcgtttcaaaaagtgtctgtctgttggaatgtcgaga
gacgctgttcggtttggtcgtattcctaagcgtgagaaacagaggatgctaattgagatg
cagagtgcgatgaagaccatgatgaacagccagttcaatggtcatctgcagaatgaccca
tcagtagagcatcaggagcagacagctttaccagcccaggaacagctgcgacccaagccc
cagctggagcaagagaacatcaaaagctctgctccctcttcggattttgccaaggaagaa
gtgattggcatggtaaccagggcgcacaaggatacctttatgtataatcaggagcagcga
gaaaactcggcagagaccgcgcagccgccgagagaacagattcctaagagcgtggagcag
tataacttgaatgatgaccgttgcggcagtgggcttagcagccactttccttgtagtgag
agccagcagcatctcggtgcacagtacagagggaggagcgcgatgccttacgccaacggg
cgtgccgtttgtgttacaaacggacattgtgtgaacttctccaatgcttatgctcagaga
gtatgtgacagaatgtccgtagatggatgttctcggaatgagaacaagaacagttacctg
tgcagcgctggagggagaatgcatctggtttgtccaatgaataagtctccgtatgtggat
cctcataaatcggggcatgaaatctgggaagaattttcgatgagcttcaccccagcagtg
aaggaagtggtggaatttgcaaagcgtattcccgggttcagagatctctctcaacatgac
caggtcaaccttttaaaagctgggactttcgaggttttaatggtacggtttgcatcatta
tttgacgcaaaggaacgtactgtcacctttttaagtggaaagaagtatagtgtggatgac
ttacactcaatgggagcaggggatctgctaaactctatgtttgaatttagtgagaagctg
aatgccctccgacttagtggtgaagagatgagcctgtttacagcagttgtcctggtctct
gcagatcgatccgggatagaaaacgtcaactctgtggaggctttgcaggaaacgctcatc
cgcgccctaaggaccttaataatgaaaaaccatccaaacgaggcctctatttttacaaaa
cttcttctaaagttgccagatcttcgatctttaaacaacatgcactccgaggagctcttg
gcctttaaagttcacccctaa
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