Bacillus sp. YP1: QF06_00925
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Entry
QF06_00925 CDS
T03701
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
bacy
Bacillus sp. YP1
Pathway
bacy00250
Alanine, aspartate and glutamate metabolism
bacy00310
Lysine degradation
bacy00350
Tyrosine metabolism
bacy00650
Butanoate metabolism
bacy00760
Nicotinate and nicotinamide metabolism
bacy01100
Metabolic pathways
bacy01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
bacy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
QF06_00925 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
QF06_00925 (gabD)
00310 Lysine degradation
QF06_00925 (gabD)
00350 Tyrosine metabolism
QF06_00925 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
QF06_00925 (gabD)
Enzymes [BR:
bacy01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
QF06_00925 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
QF06_00925 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
QF06_00925 (gabD)
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Motif
Pfam:
Aldedh
Peptidase_M32
DUF1487
DUF327
Carbam_trans_C
Motif
Other DBs
NCBI-ProteinID:
AJO57088
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All DBs
Position
213664..215052
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AA seq
462 aa
AA seq
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MPDQLTVYNPATGEEIKTIPQQSAKEVEEAIERSHQAFKTWSKTSANERASLLKKWYELI
VEHKEELADLITKENGKPYKEAVGEVLYGAGYIEWFAEEAKRVYGRTVPAPTTGKRIVVT
RQPVGPVAAITPWNFPNAMITRKAAPALAAGCTFIIKPAPDTPLSAYELARLAYEAGIPK
DVLQVVIGDGEEIGNVFTSSPKIRKITFTGSTPVGKILMKNSADTVKHVSMELGGHAPLI
VDEDADIDLAVEQAMASKYRNAGQTCVCANRLIVHESIKDEFAAKLSEQVSKLKVGNGLE
EGVNVGPIINKRGFEKIVSQIDDAVEKGAKVIAGGTYDRNDDKGCYFVNPTVLTDVDTSM
NIMHEETFGPVAPIVTFSDIDEAIQLANDTPYGLAAYFFTENYRRGIYISENLEYGIIGW
NDGGPSAVQAPFGGMKESGIGREGGSEGIEPYLETKYLSIGL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgccagatcaattaacggtctacaacccggctacgggcgaggagatcaaaacgattcct
cagcaatcagccaaagaggtagaagaagccattgaacgttcacatcaagcgtttaaaacg
tggtctaaaacatcagcgaacgaaagagcgtctcttttgaaaaaatggtatgagctgatt
gttgaacataaagaagagcttgcagatttaattacaaaggaaaacggaaaaccatacaag
gaagcagttggcgaagtgctttacggcgcaggctatatcgaatggttcgcagaggaagcg
aagcgtgtgtacggaagaacggtcccggccccgacaacgggtaaacgaattgttgtcaca
cgccagccggtcggccccgttgctgctatcacgccctggaatttcccgaatgcgatgatt
acacgcaaagcggcgcctgctcttgccgctggctgtacatttatcatcaagccggcgccg
gacacaccgctgtctgcttatgaactagcgcgcctcgcatatgaagcgggcattccgaag
gatgttcttcaggttgtaatcggcgatggagaagaaatcggaaatgtgttcacaagcagt
ccgaaaatccgcaaaatcacgttcacaggctcaacacctgtagggaaaatccttatgaaa
aacagcgcggacaccgtgaagcacgtctcaatggagctcggcggacacgccccgctgatc
gtagatgaagatgcagacattgaccttgctgttgaacaggcgatggcgtccaaataccga
aacgccggccaaacctgcgtatgcgccaaccgcctgatcgttcatgaatccattaaggat
gaatttgctgcgaaactgagcgagcaagtgtctaagctgaaagtcggaaatggacttgag
gaaggcgtcaatgtcggaccgatcatcaacaaacgaggcttcgaaaaaatcgtcagccaa
atagatgatgcggttgaaaaaggcgcgaaggttattgctgggggcacatatgaccgaaac
gatgacaaagggtgctactttgtgaatccgacagtgctcaccgatgtcgatacgtccatg
aacatcatgcatgaggaaacattcggcccggtcgccccgatcgtcacgttttctgatatt
gatgaagcgattcagcttgccaacgatacaccgtatggcttggctgcttacttcttcaca
gaaaactaccgccgcggcatctatatttccgagaatctagagtatggcattatcggctgg
aatgacggcggaccgtcagcggttcaagcgccattcggcggaatgaaagaaagcggcatt
ggccgtgaaggcggttcagaaggtatcgagccgtaccttgaaacaaaatatttgtccatc
ggtttataa
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