Bacillus sp. YP1: QF06_20610
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Entry
QF06_20610 CDS
T03701
Name
(GenBank) hypothetical protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bacy
Bacillus sp. YP1
Pathway
bacy03030
DNA replication
bacy03430
Mismatch repair
bacy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bacy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QF06_20610
03430 Mismatch repair
QF06_20610
03440 Homologous recombination
QF06_20610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bacy03032
]
QF06_20610
03400 DNA repair and recombination proteins [BR:
bacy03400
]
QF06_20610
Enzymes [BR:
bacy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QF06_20610
DNA replication proteins [BR:
bacy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QF06_20610
DNA repair and recombination proteins [BR:
bacy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QF06_20610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Motif
Other DBs
NCBI-ProteinID:
AJO60874
LinkDB
All DBs
Position
pBUYP1:66317..70126
Genome browser
AA seq
1269 aa
AA seq
DB search
MEKYKKKPFLTHSHTDASNFRLRDAINKPEELIDYCHEIGLSGVVITDHETLSSHVKAHK
YVEENKERLGDFKLGFGNEIYLVDKEDTMEKKSLNQKISFHHFILIAKSQKGYEGLKKLS
SKAWYNSFFYRGMERVPTYKDELMSLMQEYQGEIIACTACVGGELPQSLISYHDNPTPEN
KKRVHDFIVWLKGVFGEDLYFELQPSKNRDQLVANEMMLKVSEAYNVKCIVSTDAHYLNK
KYAPAHKIYLTASEGEREVDEFYATTYVMGYEELLEYFDEELLDVLVDNTNEIRSKLGTI
TFAQETKVPKAHIPKYEMSQLFVPHYMEYEYIRKYAESRYDIDRYYLHLIAEGMVAKKQD
LNKENLSRINTELDELYHITENLGQPLSSYFVLSKDVVDLMWQVSLVGVSRGSACCFYLN
YLLDIVQLNPIKFNLPHWRFLSKERPELPDIDLDSEGSKRHEIIQITKDHYGEENVLNMG
TFTTEGTRSTVLTSCRGLGIDKDIAHNIANLIPTRKGGIWSLHECFYGNPKEGTKPAKEF
CREVDKYEGLKEAMLSIEGLISGRGQHASGVIIFPDGYIKQNAMMKTTSGLPITQFDAED
SIYMGGLKLDYLSINALDRIRTALDLLLEHGKIEWQGSLRATYNKYFHPDVLEMESPKMF
DLLFKGHVLNAFQFETAVGQQALTKINPRSFDELCAGNSLMRLSTDGEQPLDKYVRFKNN
IQDWYEEMKTAGLNEEEIKILEEHLLDRYGICDTQEGLMLLAMDERIAGFSLTQANKFRK
AVAKANQKLIEDQRIKFYEGGEKTGARKVFLDYVWNKELKPQFGYSFSLPHIAGYTMILM
IEMNICHRYGAIYWKTACLSVNAGMIGETEKGTKYGAIAKAVGDMKGDILNPDINLSNKE
FTPLEEENKILFGLKPIAGLGTDAIEKIIEHRPYKSFGDFFKKIVDPGLISEAKVVSLIK
AGCFDSFYPNRRLLMIDFVKAITPKKEKLTMVQLPTIIHLADKQRFGTELEVYKFRNKLF
GRNKVPMTREIEQEFMDFLQAYPYQVDYEFKDGKLCVDQKTFDKAYKEIIEPLRMWVTSP
EAAEQFNKIKMKEFWAKHCQGTIEAWEMETLLFYSKKHELDYMPLHNYFNIANFNDLPSN
PVITGYKKNRRGNDVPQYKIDVIAGTVVEKNKQKSLVHVLTQDAGVVTVRYSKGQFAHYD
KKVVRVHGKEKEVLDPSWFERGSKLVLVGFRRGEEFVLRTKGTQFKHSTMKIKGYGSEKL
YLQMAKVAE
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atagaaaagtataagaaaaaacctttcttaactcattcacacactgatgcatcaaatttt
cgactaagagatgcgattaataaaccagaagaattgattgattactgccatgagattgga
ttgagtggagtagtcataacagatcacgaaactttatcatcccatgtaaaagctcataag
tatgttgaagagaataaagagcgtcttggagattttaaactagggttcggcaatgaaatt
tacctggttgataaagaagataccatggagaaaaaatcattaaaccaaaagattagtttt
caccactttatattaatcgccaagtcacaaaaaggatatgaaggtctgaaaaaacttagc
tctaaagcttggtacaactctttcttctaccgtggaatggaacgtgttcctacgtacaaa
gatgaattaatgtctttaatgcaggagtaccaaggggaaattattgcttgtacagcttgt
gttggtggagaacttcctcagtctctaatttcatatcatgataatcctactcctgaaaat
aaaaaacgagtacatgatttcattgtttggttaaaaggtgtttttggagaagatctttat
tttgaactgcagccatcaaaaaaccgtgaccaattagtagctaatgaaatgatgctaaaa
gtgtcggaagcttacaacgttaaatgtattgtctctactgatgcccattatctaaataaa
aaatatgctccggcacataaaatataccttacagcatcagaaggggagagagaagttgat
gaattttacgccacaacttacgttatgggatatgaagaattgcttgagtactttgacgag
gaactattagatgttcttgttgataatacgaatgagataagatccaaacttggaacaatt
acatttgcccaagaaactaaagttccgaaagctcatattccgaaatatgaaatgagccaa
ctatttgttcctcactatatggaatacgaatacattagaaaatatgctgaaagcagatac
gacatcgatcgttattatcttcatttaattgccgaaggtatggttgcgaagaaacaagat
ctgaataaagagaacctttcaagaataaatactgagcttgatgagctttaccatattact
gaaaatcttggtcagccactatcatcttattttgtcctttcaaaagatgtggttgatttg
atgtggcaagtctcgctagttggtgtgagtcgtggatctgcatgctgcttttatctgaat
taccttttagacattgtccagctgaatccaattaaatttaatcttcctcattggaggttc
ttatcaaaagaacggccggaattacctgatattgatttggattctgaaggatcaaagcgt
catgaaattattcaaatcacaaaggatcactatggagaagagaacgtcttgaacatggga
acttttacaacagaaggtactcgttcaactgttttaacttcttgccgcggattaggaatt
gataaagatattgctcataatattgctaacctaattcctactcgtaagggtggcatctgg
agcttacacgagtgtttttacggaaacccaaaagagggaaccaaaccagcaaaagaattt
tgccgtgaagttgataaatacgaaggtttaaaagaagcaatgctctctattgaaggatta
atttctggacgtggccaacatgcttcaggagttattattttccctgatggatatataaaa
caaaatgccatgatgaaaacaacttctgggctgcctatcactcagtttgatgcagaagac
agtatctatatgggtgggctcaaattagattatctgtccattaatgctcttgatagaatt
agaacagctttagatcttcttctggaacatgggaaaattgaatggcaagggtcattgaga
gcaacttacaataaatattttcatccagacgttcttgaaatggaatcaccaaaaatgttc
gatttactatttaaaggtcatgttttaaatgcttttcaatttgagacagctgttggtcag
caggcacttactaaaattaatcctcgatcctttgatgagttatgcgctggcaactcttta
atgagattgagtactgatggagagcagccacttgataaatatgttcgtttcaaaaacaac
attcaagattggtacgaagaaatgaaaacagccggtttgaatgaagaagaaattaagatt
cttgaggaacatttacttgataggtatggcatttgtgatactcaagaagggctaatgttg
cttgctatggatgaaagaattgctgggttcagcctaactcaagctaataaattccggaaa
gctgttgcaaaggcaaaccaaaaattaattgaagatcaaagaattaaattttatgaaggt
ggagaaaaaactggggctcgtaaagtattcctggactatgtttggaataaagaacttaaa
cctcagtttggatactctttctcattacctcacattgctgggtacacaatgatcttaatg
attgaaatgaatatctgccatagatatggagcgatttattggaagacagcttgcttatca
gttaacgcggggatgataggtgaaactgagaaaggcacaaaatacggtgcaattgctaaa
gctgttggagatatgaaaggtgatattttaaacccggacattaacctttcaaataaagaa
ttcacacctttagaggaagagaataagatcttattcggtctcaagccgattgccggttta
ggaacagatgcaatagaaaaaatcattgaacatcggccttataagagctttggggacttc
tttaagaagatagtcgatcctggtctaatttctgaagctaaagttgtttcgttaataaaa
gctggttgctttgattctttttatccaaacaggcgactcttaatgatcgactttgttaag
gcaattacccctaaaaaagaaaagcttacaatggtccaactaccaaccataattcactta
gctgataagcaaagatttggaactgagcttgaagtctataagtttagaaataaacttttt
ggaagaaataaagtccctatgacaagagaaatcgaacaagaatttatggatttcttacag
gcgtacccttatcaagttgattatgaatttaaagacggaaaactttgtgttgatcagaaa
accttcgataaagcttacaaagagattatcgagccattaagaatgtgggttacttctcct
gaagctgctgaacaatttaacaagattaaaatgaaagagttctgggccaaacactgccaa
ggaacaattgaagcttgggaaatggaaacattactattctactctaaaaagcatgagtta
gattacatgccattacacaactactttaatattgctaattttaacgatctgccgtctaac
ccagtcataactggatacaaaaaaaatagaagaggaaatgatgtccctcaatacaagatc
gatgttattgctggaactgtagttgaaaaaaacaagcagaagtctctcgtccatgtccta
actcaagatgctggcgttgtaactgtaagatattctaaaggtcagtttgctcactatgat
aaaaaggtcgttcgagtgcatggtaaagaaaaagaagtccttgatccatcttggttcgaa
cgaggaagtaaacttgttctggttggctttaggcgtggagaagaattcgtccttcggaca
aaaggaactcaatttaagcacagcacaatgaaaatcaaaggttatggctccgagaagtta
taccttcaaatggctaaagtcgcagagtaa
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