Bifidobacterium adolescentis BBMN23: BBMN23_1438
Help
Entry
BBMN23_1438 CDS
T03774
Name
(GenBank) DNA-directed RNA polymerase beta chain
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bado
Bifidobacterium adolescentis BBMN23
Pathway
bado03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bado00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBMN23_1438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bado03021
]
BBMN23_1438
03400 DNA repair and recombination proteins [BR:
bado03400
]
BBMN23_1438
Enzymes [BR:
bado01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BBMN23_1438
Transcription machinery [BR:
bado03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BBMN23_1438
DNA repair and recombination proteins [BR:
bado03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BBMN23_1438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AJE06410
LinkDB
All DBs
Position
complement(1692241..1695801)
Genome browser
AA seq
1186 aa
AA seq
DB search
MAEATTNTTTIIARADQHDIDLHKASDRVNFGSIREPIDVPYLLGVQTDSFDWLIGNERW
QKRVQEDLENGTNTVPHTSGLDEVFQEISPIENFAQTMSLTFSDPYFEEPRHTVQECKEK
DYTYSAPLYVNAEFENGDTGEIKSQTVFMGDFPLQTPHGTFIIGGTERVIVSQLVRSPGV
YFDRSQDRTSDKEVFGAKIIPSRGAWLEFEIDKRDVLGVRVDRKRKQSAIVFLMAIGMTK
DEIADAFKDYPLVMDALVKETVQTQDEALTDLYRKIRPADTPTPEAGKNLLDSFYFNTKR
YDLARVGRYKINRKLGLEKDINDRSLSREDIIATIKYLVTLHAGDTKFPGKRDGKDVDLR
VDVDDIDHFGNRRIRQVGELIQNQLRTGLSRMERVVRERMTTQDPEAITPQSLINIRPVN
ATIKEFFGTSQLSQFMDQNNPLAGVTNKRRLSALGPGGLSRDRASMEVRDVHPSHFGRMC
PIESPEGPNIGLIGSLATFGRINPFGFIETPYRKVVNGHVTDEVEYMTADRDAEHVIAQA
NQELDENGNFVKKQALARVGEEEAVDVPVSSVDYMDVSPRQMVSVGASLIPFLEHDEGHR
ALMGTNMQRQAVPLIESERPLVGTGAEWRAAVDSGDVILAEKPGVVTYVSADIIRTMNDD
GTTSSYKLAKFQRSNQTTCYNQVPLIHDGERVEAGTVLADGPATQKGEMALGKNLLIAFM
PWNGYNYEDAVIISQRLVQDDTLSSIHIEEYEIDARETKLGAEEITRDLPNVGEDAVANL
DERGIIRIGAEVEAGDILVGKVTPKGETELTPEERLLRAIFGEKSREVRDTSLRVPHGET
GTVIAVKEITREDAEEDGDELPNGVNQMIRVYIAQHRKITQGDKLSGRHGNKGVISRILP
EEDMPFLADGTPVDIMLNPLGVPSRMNLGQVLELHLGWIAHAGWDISLDPDAEAAWKKYV
PQGAEKGAPGTPVATPVFDGVRPETIKGLLSCTLPDRDGNKLVGPDGKATLFDGRTGEPF
PKPISVGYMYMLKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAY
GAAYTLHEMMTTKSDDVDGRVRVYGAIVKGENLPPAGIPESFKVLLKEMQSLSLNVEVLN
AEGVAIDMKDEDDDPSTSSDDLGFNIGARPDAAAKEDQVAEEPEFQ
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
ttggctgaggctacgacgaacaccaccaccatcatcgcacgcgccgaccagcatgatatt
gatctgcacaaggcgtcggaccgtgtgaatttcggctccatccgcgagcccattgatgta
ccctacctgttgggtgtacagactgacagctttgactggctcatcggcaacgagcgctgg
cagaagcgagtccaggaggatctggagaacggcaccaacaccgtgccgcacacctccggt
cttgatgaggtcttccaggagatctccccgatcgagaacttcgctcagaccatgagcctg
accttctccgatccgtacttcgaagagccgcgccacaccgtgcaggagtgcaaggagaag
gattacacctactccgcaccgctgtacgtgaacgccgaattcgaaaacggcgacaccggc
gaaatcaagtcccagaccgtgttcatgggcgatttcccgctgcagaccccgcacggcacc
ttcatcatcggcggcaccgagcgagtgatcgtgtcccagctcgtgcgttccccgggcgtg
tactttgaccgctcccaggaccgtacttccgataaggaagtcttcggcgcgaagatcatc
ccgagccgtggcgcatggctcgagttcgagatcgacaagcgcgacgtcctcggcgtgcgc
gtggaccgcaagcgcaagcagtccgccatcgtgttcctcatggccatcggcatgaccaag
gatgagatcgccgacgctttcaaggactacccgctggtcatggacgcgctcgtcaaggag
accgtgcagacccaggacgaggccctgaccgacctgtaccgcaagatccgtccggctgac
accccgaccccggaagccggcaagaacctgctggactccttctacttcaacaccaagcgt
tacgatctggcccgcgtcggccgttacaagatcaaccgcaagcttggtctggaaaaggac
atcaacgaccgcagcctgtcccgcgaagacatcatcgccaccatcaagtacctggtcacc
ctgcatgcgggcgataccaagttcccgggcaagcgcgacggcaaggacgttgacctgcgc
gtggacgtcgacgatatcgaccacttcggcaaccgtcgtatccgccaggtcggcgagctg
atccagaaccagctgcgcaccggcctgagccgtatggagcgtgtggtccgcgagcgtatg
accacccaggatccggaggccatcaccccgcagtccctgatcaacatccgtccggtgaac
gccaccatcaaggagttcttcggcacttcccagctgtcccagttcatggaccagaacaac
ccgctggctggcgtgaccaacaagcgtcgtctgtccgctctgggccccggtggcctgtcc
cgcgaccgcgcctccatggaagtgcgcgacgtgcacccgtcccacttcggccgtatgtgc
ccgatcgaatctcctgaaggcccgaacatcggtctgatcggctctctggcaaccttcgga
cgcatcaacccgttcggtttcatcgagaccccgtaccgtaaggtcgtcaacggccacgtc
accgacgaagtcgagtacatgaccgcagaccgcgatgccgagcacgtcatcgcccaggcc
aaccaggagctcgacgagaacggcaacttcgtcaagaagcaggcccttgcccgagtcggc
gaagaggaagcggtcgatgtgccggtcagctccgtcgattacatggacgtctccccgcgt
cagatggtttccgtcggcgcctccctgattccgttcctggagcacgatgagggccaccga
gcgctgatgggcaccaacatgcagcgtcaggccgtgccgctgatcgaatccgagcgtccg
ctcgtgggcaccggcgccgaatggcgcgccgccgtcgattccggcgacgtcatcctggcc
gagaagccgggcgtggtgacctacgtgtccgccgacatcatccgtaccatgaacgacgat
ggcaccaccagctcttacaagctggccaagttccagcgctccaaccagaccacctgctac
aaccaggtcccgctcatccacgacggcgaacgcgtggaagccggcaccgtgctggccgat
ggtccggcaacccagaagggcgagatggcactgggcaagaacctgctcatcgccttcatg
ccgtggaacggctacaactacgaggatgctgtgatcatctcccagcgcctcgtgcaggac
gacaccctgagctccatccacatcgaggagtacgagatcgacgcccgcgaaaccaagctg
ggtgccgaagagatcacccgcgacctgccgaacgtcggcgaggacgcggtggccaacctc
gacgagcgtggcatcatccgcatcggcgccgaagtcgaagccggcgacattctggtcggc
aaggtcaccccgaagggcgagaccgagctgactccggaagagcgtctgctgcgcgccatc
ttcggtgagaagagccgcgaggtgcgtgacacctcgctgcgcgtgcctcacggcgagacc
ggcaccgtcatcgcggtcaaggaaatcacccgcgaagacgccgaggaagacggcgacgaa
ctgccgaacggcgtgaaccagatgattcgcgtctacatcgcacagcaccgtaagatcacc
cagggcgacaagctctccggccgtcacggcaacaagggcgtcatctcccgcatcctgccg
gaagaggacatgccgttcctcgccgacggtactccggtcgacatcatgctgaacccgctg
ggcgtgccttctcgaatgaaccttggccaggtgctggaattgcacctcggctggatcgcg
cacgccggctgggacatctccctcgacccggatgccgaggccgcttggaagaagtacgtg
ccgcagggcgccgaaaagggcgctccgggcactccggtggccaccccggtgttcgacggc
gtccgtccggaaaccatcaagggcctgctcagctgcacccttccggaccgcgacggcaac
aagctcgtcggccccgacggcaaggcgaccctgttcgacggccgtaccggcgaaccgttc
ccgaagccgatctccgtgggctacatgtacatgctgaagctgcaccacctggtcgacgac
aagatccacgcccgctccaccggcccgtactccatgatcacccagcagccgctgggcggc
aaggctcagttcggtggccagcgcttcggcgagatggaagtgtgggccctcgaggcctac
ggtgccgcctacacgctgcacgaaatgatgaccaccaagtccgatgacgtcgacggccgc
gtgcgcgtctacggcgccatcgtgaagggcgagaacctgccgccggcaggcatcccggag
tccttcaaggtgctgcttaaggaaatgcagtccctgtccctgaatgtcgaagtgctcaac
gccgaaggcgtggccatcgacatgaaggacgaggatgacgatccgtccacttcctccgat
gacctcggcttcaacatcggcgcgcgtcctgacgccgccgccaaggaagaccaggttgcc
gaggagcccgaattccagtga
DBGET
integrated database retrieval system
