Burkholderia aenigmatica: L3V59_34395
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Entry
L3V59_34395 CDS
T09543
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
baen
Burkholderia aenigmatica
Pathway
baen02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
baen00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L3V59_34395 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baen03021
]
L3V59_34395 (rpoD)
Transcription machinery [BR:
baen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L3V59_34395 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KIND
GerE
Motif
Other DBs
NCBI-ProteinID:
UKD14749
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All DBs
Position
2:3557936..3560362
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AA seq
808 aa
AA seq
DB search
MAKTTGGKKVTGKGSTEPTKQVTAAKSASSTRTTSSATSAPAGKKTAAGTAQVAPASAAR
TRAAARPDSGPAKPAAKRASAKSARDTTAAADETAVRTTHAPTVQPAVVQQPRVDIAGTA
NSMTKKLNEVSVEDDANQSDEQPAAAAAAAAPGKSKVRDRRAKEKALLKEAFATSTPGTA
EELEERRVKLRALIKLGKERGFLTYAEINDHLPDNFTETEALEGIIGTFNDMGVAVYEQA
PDAETLLLNDNAPAASSDDEVEEEAEVALSTVDSEFGRTTDPVRMYMREMGTVELLTREG
EIEIAKRIEDGLRHMVMAISACPTTIADILAMAERVANEEIRVDELVDGLLDPNASDSAD
TDGFSAKEAEAIENEDEEAEEEEEEEEEEEDDGAAQASANAAQLEALKRASLDKFSQISE
WFDKMRRAFEKEGYKSKAYLKAQETIQTELMTIRFTARTVERLCDTLRAQVDEVRQVERQ
ILHIVVDKCGMPRSEFIARFPGSETDLDWSEKVMAEGHSYSAVLSRNVPAIREQQQRLLD
LQARVVLPLKDLKETNRQMAAGELKARQAKREMTEANLRLVISIAKKYTNRGLQFLDLIQ
EGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRI
SRQILQETGLEPDPATLAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDN
NTVAPADAALHASMRDVVKDVLDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRER
IRQIEAKALRKLRHPSRSDKLKSFLEGN
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagacgacaggcggaaagaaagtaacaggcaagggctcgacggagccgaccaag
caggtcacagcggccaagtctgcttcttccaccaggacaacgtcttcagccacgtcagcc
ccagcaggaaagaaaaccgcggccggcactgctcaggttgcgccggcgtcggcagccaga
acacgggctgccgccagacccgactccgggccggccaagccggcggcgaagcgggcaagt
gcgaaaagcgcaagggacacgactgccgccgcggacgaaacggcagtacgtactactcat
gcacccacggttcaaccggctgtcgtccagcagccgcgagtcgatatagccggtacggcg
aactccatgaccaaaaagctgaacgaagtatccgtcgaagacgacgcaaatcagagcgac
gagcagcccgcagcagcagcagcggcggctgcaccgggcaaatccaaggtgcgcgatcgt
cgcgccaaggaaaaggcgctactgaaggaagcgttcgcgacgagcacgccgggtacggcc
gaggagctcgaagagcgccgcgtgaaactgcgcgcgctgatcaagctcggcaaggagcgc
ggcttcctcacgtacgctgaaatcaacgaccacctgccggacaacttcaccgagaccgaa
gccctcgaaggcatcatcggcacgttcaacgacatgggcgtggcggtctacgagcaggcg
ccggacgcggaaacgctgctcctgaacgacaacgcgcccgccgcgtcgtcggacgatgaa
gtcgaagaggaagcggaagtcgcgctgtccaccgtcgattcggaattcggccgcacgacc
gatccggtccggatgtacatgcgtgaaatgggtacggtcgaactgctcacgcgcgaaggc
gaaatcgagatcgcgaagcggatcgaggacggcctgcgccacatggtgatggccatctcc
gcgtgcccgacgacgatcgctgacatcctcgcgatggctgaacgcgtcgcgaacgaggag
atccgcgtcgacgaactcgtcgacggcctgctcgatccgaatgcttcggactccgccgat
accgacggcttctccgcgaaggaagcggaagcgatcgagaacgaggacgaggaagccgaa
gaggaagaggaagaagaggaagaggaggaagacgacggtgccgcccaggcatcggccaac
gccgcccagctcgaagccctcaagcgtgcgtcgctcgacaagttctcgcagatcagcgag
tggttcgacaagatgcgccgcgcgttcgaaaaggaaggctacaagtcgaaggcctacctg
aaggcgcaggaaacgatccagacggaactgatgacgatccgcttcaccgcgcgtaccgtc
gaacgcctgtgcgacacgctgcgtgcgcaggtggacgaagtgcgtcaggtcgagcgtcag
atcctgcacatcgtcgtcgacaagtgcggcatgccgcgttcggaattcatcgcgcgcttc
ccgggcagcgagaccgatctcgactggtccgagaaggtcatggccgaaggccattcgtac
agcgcggtgctgtcgcgtaacgttccggcgatccgcgaacagcagcagcgcctgctcgac
ctgcaggcacgcgtcgtgctgccgctgaaggacctgaaggaaaccaaccgccagatggcg
gccggcgaactgaaggcgcgccaggcgaagcgcgaaatgaccgaggcgaacctgcgtctc
gtgatctcgatcgcgaagaagtacacgaaccgcggcctgcagttcctcgacctgatccag
gaaggcaacatcggcctgatgaaggcggtggacaagttcgaataccgtcgcggctacaag
ttctcgacctacgcgacgtggtggatccgccaggccatcacgcgctcgatcgcggaccag
gcgcgtacgatccgtattccggttcacatgatcgagacgatcaacaagatgaaccgcatc
tcgcggcagatcctgcaggaaaccggtctcgagccggatccggcaacgctcgccgagaag
atggagatgccggaagacaagatccgcaagatcatgaagatcgcgaaggagccgatctcg
atggaaacgccgatcggtgacgacgacgattcccatctcggcgacttcatcgaggacaac
aacacggtcgcgccggcggatgccgcgctgcatgcgagcatgcgcgatgtcgtgaaggac
gtgctcgattcgctgacgccgcgtgaggcgaaggtgctgcggatgcgcttcggtatcgag
atgagcaccgatcacacgctcgaggaagtcggcaagcagttcgacgtcacgcgcgagcgg
atccgtcagatcgaggccaaggcgctgcgcaagctgcgtcacccgagccgttccgacaag
ctgaagtcgttcctcgaagggaactga
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