Bacillus aerophilus: BAE_01220
Help
Entry
BAE_01220 CDS
T08735
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
baer
Bacillus aerophilus
Pathway
baer03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
baer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BAE_01220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baer03400
]
BAE_01220
Enzymes [BR:
baer01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BAE_01220
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BAE_01220
DNA repair and recombination proteins [BR:
baer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BAE_01220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QAR51491
LinkDB
All DBs
Position
complement(234569..235402)
Genome browser
AA seq
277 aa
AA seq
DB search
MPELPEVETVRRTLQRLVKGKTIETVDIKWPNIIKRPGEPEEFARRMVGETIQIIERRGK
FLLFHLDHYVMVSHLRMEGKYRVHETGEPYDKHVHVVFTFTDGTELRYHDVRKFGTMHLF
QPGEEEKELPLSQLGYEPFSDSFTPDYLWEQLKKTSRVVKTALLDQKIVVGLGNIYVDEV
LFKSGIHPETKANQLSLASCKVLHKHIIETLQVAVDAGGSTIRSYINSQGDIGTFQLQLL
VYDRRGEPCQTCGSIIEKTVVGGRGTHFCVTCQKRPS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccagaggttgagaccgtccggcgcactcttcagcggttagtcaaagga
aaaacgattgaaacggtcgatatcaaatggccaaatatcatcaaacgtcctggggaaccg
gaagagttcgctagaaggatggtaggagaaaccattcaaatcattgaaagaagagggaag
tttctactctttcatttagaccactatgtgatggtctcccatttaagaatggaagggaaa
taccgtgtacatgaaactggtgagccttatgataaacatgtacacgtcgtctttacgttc
acagatggtaccgaacttcggtaccatgatgtccgtaaatttgggacgatgcatctattt
cagccaggcgaagaagaaaaagaacttccgctatcacagctggggtatgaacctttttca
gattcatttacaccagactatttatgggagcaattaaagaaaacctcccgcgtagtcaaa
acggctttacttgatcaaaaaatcgtggttggcctcggtaatatttatgtagatgaagtg
ctgtttaaatcaggcattcatccagaaacaaaagcgaatcagctaagtcttgcatcttgc
aaggtgctccacaaacatattattgaaacgcttcaagtggctgttgatgcaggaggtagc
accattcgttcctacatcaattcacaaggtgatattgggacttttcaattacagcttctt
gtatatgaccggcggggagaaccttgccagacgtgcggcagtatcatagagaaaacagtg
gtgggagggcgcggcactcatttttgtgtgacctgccaaaaacgcccttcataa
DBGET
integrated database retrieval system
