Bombus affinis (rusty patched bumble bee): 126916309
Help
Entry
126916309 CDS
T09368
Name
(RefSeq) cell adhesion molecule Dscam2 isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
baff04515
]
126916309
Cell adhesion molecules [BR:
baff04515
]
Immunoglobulin superfamily
DSCAM family
126916309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
Ig_6
V-set_CD47
Ig_C17orf99
BiPBP_C
fn3_2
SIT
Motif
Other DBs
NCBI-GeneID:
126916309
NCBI-ProteinID:
XP_050577944
LinkDB
All DBs
Position
5:complement(7296768..7604136)
Genome browser
AA seq
2000 aa
AA seq
DB search
MFRECVELIAFQRVSALGMDSTVAVLLLTACILELVVGQQGPVFVLEPPSTLVFSNTTGS
QLSCSAHGSPTPHVTWITSPDQRSVTAVPGLRQLLGNGTLYFPPFLAQDFRAEVHNARYR
CRATSSVGTVLSREVTLRAVLTVPGYDVRVNRSPVVEGCNAVLSCTAREDVKEHLTVTSW
FRDDAILLPGSTDTGGRFVVTSQGDLHIRAARPEDGRATYSCLTFHALTGERRRSEPATL
TVAEPTGSMPPRLMQRSQIAISAESGSDVHLTCSAQGTPPPQFTWYRDVNGHSIPVESFG
RIQLWGDLMQIRRVDAQDAGRYICRASNQVGEQRAETHLSVTSKLNARIQPRVQIINSGE
SATMNCTVEGYPVESVEWLHDGVPVLTAQDTRIRLLAPLVLVIGSVGRKDKGMYQCLVRS
DKENAQATAELKLGDTVPELQYTFIEQALRPGPPVSLRCSATGSPPPSFTWLLDGEPLSE
IASGHRYAIGQYVDQSGDVISHLNISSAGAEDGGLYACVAANTLATVEHKARLNIYGPPY
IRSIGPVRAIAGVDTTIACPYSGYPITSVEWSRGGVALPLDIRHRVDSEGHLTIANVDPN
DAGIYTCMVKARSGETASRDIRLTVSSPPVMSPFNFPSNLQEGSRAQVTCTVTSGDLPIY
FSWLKDGEPLPSSLRIEERVAEFFSLLVFKELSSRHSGKYTCVATNSAAKVNHTAELLVK
VPPQWIFEPQDVATLLGNPLNVHCEAKGFPPPRVTWLRARERTSNDYQPLVDGSDGRLTI
LPNGSLWTASAGPQDEGHYLCRANNGIGSGLSKVIYVSVHEPARFEFQSKNVTIRRGESV
TLDCTVIGDNPIEVQWMHNSDRLDTNSHRLSISQIKTDNGLKSQLSIASSDRQDSGVYRC
TADNAYGRSEHLIYLAVQERPDPPASLEVIEIGSRSIRLLWKRAFDGNSPIRNYVIQYRS
LNHGLADDWNPAKTHNVTYTPGSSNNGNNIHPTQNGLSPFETTSDDQEVALVGGLHPAVT
YTFRIFAINSIDVSVPTDPVVAKTQEEAPTEPPQNIKVQSAGPGELMVSWQPPPKESCNG
DLLGYIVTWSEHSSSTSGVNQSKSLTVNGWATTKVQLTGLRKFTKYDISIRAFNSIASGP
ASIPIVGTTQEGVPETPPTQVSCIPLSSQSVKVSWSAPPPHQHGGIIQGYKVYYRPVPTD
NMDISTVGEVKKTSSVETYLHTLYKYTNYSIRVLAYTGAGDGVLSPPIFCTTEEDVPGPP
AGIKALALTAESILVSWLPPLQPNGNVSKYTVYSREAGSSNHNTHTMHEPPSSPTDTLTM
ELRGLVESKLYEFWVSATTGLGEGEPTTIVTQTTNTRGFNKIVSTAPARVASFSQLLRRA
IKSSITLSCLVVGNPTPRPIWTYRNSQVSTGRHYELTADGHLNIRGLEQSVAGNYTCSAS
NLFGDDSITYTLVVVMPPRAPMLELQYTTTNSIRLRWNHPNNGGATIQGYVLSYKRDQGG
WEEIALSPEQTEFILSGLKCGSSYLAHLTAHNRVGTGDPSPLISATTKGTAPLLPKERDI
ISANGTSVKLNLISWPNGGCPIQYYTVEYRRRVSTEPWNLVASRATEDLVIRELKTASWY
SLRLTAHNDAGSTQTQMEFATTTLSGVSIGPPNDLIMENDVKKAIPNHKVLYVVVPLVCA
IVLIISAAILGYVMLKRSGRANYLGEILPGQQQNQQSGLGLVQQQQQHQQHHHLSSCMST
MQLKSTAERDNRRNHQVYTSSPVKQENHKSNDHGSEMYEISPYATFSVPGRENRSVTTAT
LDYTMQFKTFGHLENEDINTIDYERSSVDFERSKTPRWHKQRYFPSIAEAESKLRSSRQG
SGSDTSGSPCGECAGPSYRVPVKPCRDVFSRGVESSTESNNEGSPSLARRRSRQPSRSTR
SSVEDMTLLPPSGFSDSRELSDVECDRDRDRDRERDWQDLSTGTRHGGSLGRLPIEAVES
MLARYQQRKEQERQEFTIHV
NT seq
6003 nt
NT seq
+upstream
nt +downstream
nt
atgttccgagaatgcgttgaattgattgcgtttcaaagagtttcggctttgggaatggac
tcgaccgtggcggtactccttctcaccgcttgcattctggaactcgtggttggtcagcaa
ggtccggtgttcgttctcgagccaccaagtactctggtcttttccaataccacaggctca
cagctaagctgttccgctcatgggagcccaacgccgcacgtcacctggataactagtccg
gatcagagatcggtcaccgcagttcctggactaagacagctgctcgggaacggcaccctc
tactttccgccatttctggcgcaggactttcgagcggaagtgcacaacgctaggtacagg
tgtcgtgcaaccagttccgttggaacggtgctttccagggaagttactcttcgtgctgtg
ttgacagtacctgggtatgatgtaagggtgaacaggtctccggtggtggagggatgcaac
gcggttttatcttgcacggcaagagaagacgtgaaggaacatctgacagtcacctcctgg
tttcgtgacgatgccattcttctacctggaagcacggacacgggtggaaggttcgtggtc
acgtctcagggggacctgcatatccgagccgccagaccggaagacggcagagccacctat
tcgtgcttaacttttcacgcgttgaccggtgaaagaagaagaagcgagcctgcaacgtta
acagtcgcagaaccaacgggatctatgccaccacggttgatgcagagatctcagatcgcc
atctctgctgaaagcggctcggacgttcatctaacttgctcagcccaagggactccacca
ccacaatttacctggtatcgcgatgttaacggtcattcgataccggtggagtcatttggt
cgaattcaactgtggggcgatttaatgcaaattcgccgcgtggacgctcaggacgcagga
aggtacatttgtcgagccagcaatcaggtcggcgagcaacgagcggaaacacacctgtcg
gttacgtcaaaacttaacgcacgaatacaaccccgagttcagatcatcaattccggggag
tcagccactatgaattgcacggtggagggttatccggtcgaaagcgtcgagtggttgcac
gacggtgtgccggtattgaccgcgcaggacacgagaatcagattgctggctcctctggtg
cttgtgataggctcggtcggccgaaaggacaaggggatgtatcagtgcctggtcagaagc
gacaaggagaacgcgcaggctaccgccgaattgaaacttggagatactgtaccagagttg
caatacacgttcatcgagcaagcactgcggccaggtcctccagtgtccttgagatgttcc
gctaccggatctcctccaccgtcgttcacttggttgctggatggagagcctctaagcgag
atcgcctctggacacaggtacgcgataggacagtatgtcgatcagtccggagacgtgatc
agtcatttgaacatatcgtcggctggtgctgaagatggtggtctttacgcttgtgtcgct
gccaataccttggctacagtcgagcacaaagctagactaaacatttatggaccgccgtac
atccgatcgataggaccagttcgtgcgatagccggtgtcgataccaccatagcttgtcct
tattccggctatcctatcacgtcagtcgagtggtctcgtggaggagttgcactgcctctt
gacataaggcaccgtgtagacagcgaaggccatcttaccatcgccaatgtggatccaaac
gatgctggcatttatacttgcatggttaaagcaagatccggtgaaacggcgagcagagac
attcggttaacagtcagtagtccacctgtaatgagtcctttcaatttcccttcaaacctc
caagaaggaagtcgcgcccaggtcacctgcaccgtcacttccggtgatcttccaatttac
ttctcctggctaaaggatggtgaaccgttaccttcctctctacgtatcgaggagagggta
gctgaattcttcagtctactggtttttaaggaactttcttcacgacacagtggcaaatat
acctgcgtggcgactaacagtgcggccaaagtcaaccacacagcggaacttttggtaaaa
gtacctccacaatggattttcgagccgcaagacgtggccaccctcctgggaaatccattg
aacgtccattgtgaggccaagggatttcctccgccacgtgtcacgtggttgcgtgccagg
gaaagaacttccaacgactatcaacctcttgttgatggttctgatggaagattaactatt
ctaccgaatggatctttgtggacagcatctgctggaccacaggatgaaggacattatctg
tgtcgagcaaataatggcattggatctggtctaagtaaagtgatctatgtatctgttcat
gaaccagcaaggttcgagttccagagtaagaacgtgacgatccgtcgtggcgagtccgtg
acgcttgattgtactgtcatcggggataatcccatagaagtgcaatggatgcataatagt
gatcgtttagatactaacagtcaccggttaagcatcagtcaaataaaaacagacaacggc
ctcaagtcacaattatctatagcaagcagtgatcgtcaagattctggagtttacaggtgc
acagcggacaatgcctatgggagaagcgaacatctgatttatcttgctgttcaagagaga
ccagatccaccagcctcgctagaagtcatagaaatcggctcgcgatcgatacgattattg
tggaagagagctttcgatgggaacagcccgatacgaaattacgttattcagtatcgatct
ctgaatcacggtttagctgacgattggaatcccgcaaaaacgcacaacgtcacttacacc
cctggaagttccaataacggaaataacatacatccaacgcaaaatggtttatctcctttc
gagactactagcgacgatcaggaagtagctttggtaggaggacttcatccagcagtgact
tacacgtttcgtatatttgccataaattcaatagatgtgagtgtgcctactgatcccgtg
gtcgccaaaactcaagaagaagcacctactgaaccgccacaaaatatcaaagtgcaatca
gcaggacctggagaactcatggttagctggcagccacctccaaaggaatcctgtaacgga
gatctattgggctacatagtgacatggtcagagcattcatcttcgacatcaggtgtgaac
caaagcaaaagtttaaccgtgaacggatgggcgactacaaaggtgcagcttacaggcttg
agaaagttcaccaagtacgatatatcgatcagagctttcaatagtatagccagcggccca
gccagcattcccattgttggaacaactcaggaaggagtacccgagactccgccaacgcaa
gtatcatgtattcctctgtcttcccaaagtgtaaaagtttcttggagcgcacctccaccc
catcaacatggaggaatcattcagggttataaagtatactatagaccagtacccactgac
aacatggatatatcgacagtgggtgaagtaaagaagacatccagcgtagaaacttatcta
cacactctgtacaagtatacgaattactctattcgagtattggcttatactggtgctggt
gatggagttctaagtccgccgattttttgtacaacggaggaagatgtaccaggtcctcca
gctggtatcaaagctttagcgctaaccgcggagagtatattagtttcgtggttaccaccc
ctacaaccaaatgggaacgtttccaagtacacggtttacagcagggaggcaggttccagt
aatcataacacgcacaccatgcacgaaccaccatcgtcaccgactgacactcttactatg
gaactaagaggtttggttgaaagtaaattgtacgagttctgggtgtcagcaacgacaggg
ctgggtgaaggagaaccgaccaccatagtaactcaaactacaaatactagagggtttaat
aaaattgtttctacagctccagctagagtggcgtctttttcacaattattaagaagagcg
attaaatcatcaattaccttgtcttgtttggtcgtgggtaatcctacgcctcgtccaata
tggacatatcgaaatagccaagtttctactggaagacattacgaattaactgctgatggt
catctcaatattcgtggattagaacaatcagtcgctgggaattacacgtgttcagctagc
aacttattcggtgacgattccatcacttacacgttggtcgtggtgatgcctcccagagca
ccaatgttagaactacagtatacaacaacgaatagcataagacttaggtggaaccatcct
aataatggtggtgctactattcaaggctatgtgttaagctacaaaagggaccagggtggc
tgggaagaaatcgcattatcacccgaacaaactgaattcattttatcaggtttaaaatgc
ggttcttcctacttggcacatttaacagctcataatcgtgtgggcactggagatccaagt
cctttaattagtgccacgaccaaaggaactgctcctttattaccaaaagaacgagacatc
atctctgccaatggcacctctgtcaaattaaatcttatatcttggccaaatggtggttgt
ccaattcaatattacaccgtagagtaccgtagacgtgtcagcactgaaccatggaattta
gtggcaagtcgtgctacagaagatctagtcataagagagttaaagactgcctcgtggtat
agtttacgtctgacagctcataatgacgctggatccacgcaaacgcaaatggaattcgcg
acgaccactctcagtggcgttagtattggtcctccgaatgacctgattatggaaaacgat
gttaaaaaagctatacctaatcataaagtactttacgtggttgtacctctcgtctgtgca
atcgtgctaattatttccgccgccattctgggatacgtaatgctgaaacgcagtggaaga
gccaattacttaggagaaattcttcctggacaacaacagaatcaacagtcaggattgggt
ttggttcagcaacagcagcagcatcagcaacatcatcatctttcaagctgtatgtcgacc
atgcaattaaagtccactgctgaacgtgataatagaaggaatcatcaggtttataccagt
tcgccagtgaagcaagagaaccataagtctaacgaccatggatcagaaatgtacgaaata
agtccgtacgccacgttcagcgtaccaggaagagaaaatcgttcagtaacaacagccaca
ctcgattatacgatgcaattcaaaacgtttggacatttggagaacgaagacatcaacacg
atcgattacgagaggtccagcgtggacttcgagaggtctaaaactccaaggtggcacaag
caacgatacttcccaagcatcgcagaagcggagagcaagctgcgctcgagtcgtcaaggt
tccggaagcgacacgtccggaagcccttgcggagagtgcgctggacctagttacagggta
ccagtgaagccttgcagagatgtattttcacgaggggtggaatcgagtacagaatccaac
aacgaaggctcaccttcacttgcgagacgacgaagccgacagccgagccggtctactcgc
agttcggtggaggacatgacgttattgccgccaagcgggtttagcgacagccgcgaattg
agcgacgtagagtgcgaccgtgatcgtgatcgtgatcgtgaacgggactggcaagatctg
tcgaccgggacccgccacggcggcagtttgggtagactgccgatcgaggccgtcgaatct
atgctcgctaggtaccaacaaagaaaggaacaagaaaggcaagaattcactatacatgta
tga
DBGET
integrated database retrieval system
