Heyndrickxia coagulans 36D1: Bcoa_2524
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Entry
Bcoa_2524 CDS
T01628
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bag
Heyndrickxia coagulans 36D1
Pathway
bag03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bcoa_2524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bag03400
]
Bcoa_2524
Enzymes [BR:
bag01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Bcoa_2524
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Bcoa_2524
DNA repair and recombination proteins [BR:
bag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bcoa_2524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn-ribbon_8
NFACT_N
Auto_anti-p27
DZR
Motif
Other DBs
NCBI-ProteinID:
AEP01702
UniProt:
G2TPH3
LinkDB
All DBs
Position
2757459..2758292
Genome browser
AA seq
277 aa
AA seq
DB search
MPELPEVETIRRTLAQLVAGETIESVTVLLPKMVKKPLHTEAFADALAGETIRSLGRRGK
FLIFYTDHYALVSHLRMEGRYRVYDQNEPVEKHTHMIFHFQSGKELRYKDVRKFGTMHLF
LKGEELSSLPLSKLGPEPLSDTFTEKYLYGQLKKTERNVKSCLLDQTVISGLGNIYVDES
LFRAHIYPERKAKSLTKKDVHLLHSEIIQTLQEAVEKGGSTVRSYVNSQGQMGMFQLELY
VYGRKGEPCRKCGTPIEKMVTAGRGTHYCPNCQKKRR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccggaagtggaaacgatacgaagaacgctggcacagctcgttgctggc
gaaacgattgaaagcgtaacggtgcttttgccaaaaatggtcaaaaagccgcttcacaca
gaggcgtttgccgatgctctggccggtgaaacgatccgttcgctcgggcggcgcggcaaa
tttctcattttttacacggaccattacgcgcttgtctcccatttgcgcatggaagggcga
taccgggtttatgaccaaaatgaaccggttgaaaagcatacgcatatgatttttcatttt
caatccggaaaggaactaaggtacaaagatgtccgcaaatttgggacaatgcatttgttt
ttaaagggggaggaattgtcctctctcccgctttcaaaactcggccctgagccgctatcc
gatacgtttacggaaaaatatttatacggccaactaaagaaaacggaacgcaatgtcaaa
tcctgtttgctcgatcagacggtcatttccgggctcgggaacatttatgtggacgaatcc
ttgttccgtgctcacatctatccggagcgaaaagcaaagtcactgacaaaaaaagacgtg
catcttttacacagcgagatcattcaaacgttgcaggaagccgttgaaaaaggcggcagc
acggtccgttcctatgtaaattcgcaaggacagatgggcatgttccagctcgagctgtat
gtttacggccggaaaggggagccgtgccggaaatgcggcaccccgattgaaaagatggtt
acagcaggccgcggcacccattactgcccgaattgccaaaagaaacgcagataa
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