Bacillus sp. LM 4-2: BsLM_0793
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Entry
BsLM_0793 CDS
T03908
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
balm
Bacillus sp. LM 4-2
Pathway
balm00040
Pentose and glucuronate interconversions
balm01100
Metabolic pathways
balm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
balm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BsLM_0793
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BsLM_0793
Enzymes [BR:
balm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
BsLM_0793
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AKE22592
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Position
807408..808670
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AA seq
420 aa
AA seq
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MKKVMLATALFLGLTPAGANAADLGHQTLGSNDGWGAYSTGTTGGSKASSSNVYTVSNRN
QLVSALGKETNTTPKIIYIKGTIDMNVDDNLKPLGLNDYKDPEYDLDKYLKAYDPSTWGK
KEPSGTQEEARARSQKNQKARVMVDIPANTTIVGSGTNAKVVGGNFQIKSDNVIIRNIEF
QDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKY
QHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQR
APRVRFGQVHVYNNYYEGSTSSSSYPFSYAWGIGKSSKIYAQNNVIDVPGLSAAKTISVF
SGGTALYDSGTLLNGTQINASAANGLSSSVGWTPSLHGAIDASANVKSNVINQAGAGKLN
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtgatgttagctacggctttgtttttaggattgactccagctggcgcgaac
gcagctgatttaggccaccagacgttgggatccaatgatggctggggcgcgtactcgacc
ggcacgacaggcggatcaaaagcatcgtcctcaaatgtgtataccgtcagcaacagaaac
cagcttgtctcggcattagggaaggaaacgaacacaacgccaaaaatcatttatatcaag
ggaacgattgacatgaacgtggatgacaatctgaagccgcttggcctaaatgactataaa
gatccggagtatgatttggacaaatatttgaaagcctatgatcctagcacatggggcaaa
aaagagccgtcgggcacacaagaagaagcgagagcacgctcgcagaaaaaccaaaaagca
cgggtcatggtcgatattcctgcaaacacgacgatcgtcggttcagggactaacgctaaa
gtcgtgggaggaaacttccaaatcaagagtgataacgtcattattcgcaacattgaattc
caggatgcctatgactattttccgcaatgggatccgactgacggaagctcagggaactgg
aactcacaatacgacaacatcacgataaacggcggcacacacatctggattgatcactgt
acatttaatgacggttcgcgtccggacagcacatcaccgaaatattatggaagaaaatat
cagcaccatgacggccaaacggatgcttccaacggtgctaactatatcacgatgtcctac
aactattatcacgatcatgataaaagctccattttcggatcaagtgacagcaaaacctcc
gatgacggcaaattaaaaattacgctgcatcataaccgctataaaaatattgtccagcgc
gcgccgagagtccgcttcgggcaagtgcacgtatacaacaattattatgaaggaagcaca
agctcttcaagttatcctttcagctatgcatggggaatcggaaagtcatctaaaatctat
gcccaaaacaatgtcattgacgtaccgggactctcagctgctaaaacgatcagcgtattc
agcgggggaacggctttatatgactccggcacgttgctgaacggcacacagatcaacgca
tcggctgcaaacgggctgagctcttctgtcggctggacgccgtctctgcatggggcgatt
gatgcttctgctaatgtaaaatcaaatgttataaatcaagcgggtgcgggtaaattaaat
taa
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