Burkholderia ambifaria AMMD: Bamb_2124
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Entry
Bamb_2124 CDS
T00398
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Bamb_2124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bam03400
]
Bamb_2124
DNA repair and recombination proteins [BR:
bam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Bamb_2124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
Motif
Other DBs
NCBI-ProteinID:
ABI87680
UniProt:
Q0BDU3
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Position
1:2335237..2337897
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AA seq
886 aa
AA seq
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MTTLSPEAFAGHTPMMQQYLRIKADHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQR
GASAGTPIKMAGVPHHAVEQYLAKLVKMGESVAICEQIGDPATSKGPVERKVVRVVTPGT
LTDAALLSDKNDVYLLAMCTGHNKRGVAVNIGLAWLNLASGALRLAEIEPDQLGTALERI
RPAEILTADGATDAVPAGAGAIKRVPAWHFDIASGTQRLCDQLDVAGLDGFGAHSLTSAC
GAAGALLLYAAATQGQQLRHVRSLKVENETEYIGLDPATRRNLELTETLRGTESPTLYSL
LDTCCTTMGSRLLRHWLHHPPRASVAAQSRQQAIGALLDAPADASLDALRSALRQIADVE
RITGRLALLSARPRDLSSLRDTFAALPALRERISAIVANADALTRVDAALAPPAECLDLL
TSAIAPEPAAMVRDGGVIARGYDAELDELRDISENCGQFLIDLEARERTRTGIANLRVEY
NKVHGFYIEVTRGQTDKVPDDYRRRQTLKNAERYITPELKTFEDKALSAQERALARERAL
YDGVLQALLPFIPECQRVASALAELDVLAAFAERARTLDWVAPTFTDEIGIEIEQGRHPV
VEAQVEQFIANDCRFGAERKLLLITGPNMGGKSTFMRQTALIALMAYVGSYVPAKSACFG
PIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALA
WAIARHLLAQNGCYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHGIVFLHAVNEGPAN
QSYGLQVAQLAGVPAPVIRAARKHLAYLEQQSATQNTPQLDLFSAPPAAAADELECADAP
AVSALPHPALEKLRDIDPDDLKPRDALDLLYELRTLVRSHDADGHA
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgctgtcgcccgaggccttcgctggccacaccccgatgatgcagcagtacctg
cgcatcaaggccgatcaccccgacacgctcgtcttctatcggatgggcgacttctacgag
ctgttcttcgaagacgcggagaaggccgcgcgcctgctcgacctgaccctcacgcagcgc
ggcgcatcggccggcacgccgatcaagatggccggcgtcccgcatcacgcggtcgaacag
tatctggcgaaactcgtgaagatgggcgaatcggtcgcgatctgcgagcagatcggcgac
ccggccacatcgaaagggccggtcgagcgcaaggtcgtgcgcgtcgtcacgcccggcacg
ctgaccgatgccgccctgctgtccgacaagaacgacgtctacctgcttgcaatgtgcacg
ggccacaacaagcgcggcgtcgcggtcaacatcggcctcgcatggctgaacctcgcgagc
ggcgcactgcggctcgccgaaatcgaacccgaccagctcggcaccgcgctcgaacgcatc
cgccctgccgagatcctgacggcggacggcgcaaccgacgcggtgcccgccggcgccggc
gcgatcaagcgcgtaccggcatggcacttcgacatcgcatcgggcacgcagcgcctgtgc
gaccagctcgacgtcgcgggcctcgacggcttcggcgcgcattcgctgacgagcgcatgc
ggcgccgcgggcgcgctgctgctgtacgcggcggccacgcagggccagcaactgcgtcac
gtgcgcagcctgaaggtcgagaacgaaacggaatacatcgggctcgatccggcgacgcgc
cgcaacctcgagctgaccgaaacgctgcgcggcaccgaatcgccgacgctgtactcgctg
ctcgacacgtgctgcacgacgatgggcagccgcctgctgcgtcactggctgcatcacccg
ccgcgcgcgtcggtcgccgcgcaatcgcgccagcaagcgatcggcgcactgctcgatgcg
cccgcggacgcgagcctcgacgcactgcgcagcgcgctgcgccagatcgccgacgtcgaa
cggatcaccgggcgtctcgcgctgctgtccgcgcggccgcgcgacctgtcgagcctgcgc
gatacgttcgccgcgctgccggcgctgcgtgagcgcatcagcgcgatcgtcgcgaacgcg
gatgcgctcacgcgcgtcgacgcggcgctcgcaccgcccgccgaatgcctcgacctgctg
acgagcgcgatcgcccccgagccggccgcgatggtgcgcgacggcggcgtgatcgcacgc
ggctacgacgcggagctcgacgagctgcgcgacatctccgagaactgcggccagttcctg
atcgatctcgaagcgcgcgagcgcacccgcacgggcatcgcgaacctgcgcgtcgaatac
aacaaggtgcacggcttctacatcgaggtcacgcgcggccagaccgacaaggtgcccgac
gactatcgccgccgccagacgctgaagaatgccgagcgctacatcacgcccgaactgaag
accttcgaggacaaggcgctttccgcgcaggaacgcgcactggcccgcgagcgcgcgctg
tacgacggcgtgctgcaggcgctgctgccgttcattcccgaatgccagcgcgtcgcatcg
gcgctcgcggagcttgacgtgctcgccgcgttcgccgagcgtgcacgcacgctcgactgg
gtcgcaccgaccttcaccgacgaaatcggcatcgagatcgaacaggggcgccatccggtc
gtcgaagcgcaggtcgagcagttcatcgcgaacgactgccggttcggcgccgagcgcaag
ctgttgctgatcaccggcccgaacatgggcggtaagtcgacgttcatgcgccagacggcg
ctgatcgcactgatggcgtatgtcggcagctacgtgcccgcgaagtcggcctgcttcggc
ccgatcgaccgcatcttcacgcggatcggcgcggccgacgacctcgccggcggccgctcg
acgttcatggtcgagatgaccgaagccgccgcgatcctcaacgacgcgacgccgcaaagc
ctcgtgctgatggacgaaatcggccgcggcacgtcgacgttcgacggcctcgcgcttgca
tgggccatcgcgcgtcacctgctcgcgcaaaacggctgctacacgctgttcgcgacgcac
tacttcgagctgacgcaactgccggccgaattcccgcaagcggcgaacgtccacctgtcg
gccgtcgagcacggccacggcatcgtgttcctgcacgcagtcaacgaaggtccggcgaac
cagagctacgggctgcaggttgcgcagctcgcgggcgtaccggcgccggtgatccgtgcc
gcacgcaagcatctcgcgtatctcgagcagcagtcggccacgcagaacacgccgcagctc
gatctcttcagcgcgccgcccgccgcggcggccgacgaactcgaatgcgcggatgcgccg
gcggtctccgccctcccgcatccggcgctcgaaaagctgcgcgacatcgatcccgacgac
ctcaagccgcgcgacgcgctcgacctgctgtacgaactgcgcacgctcgtccgctcgcac
gatgccgacgggcacgcataa
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