Bacillus velezensis UCMB5036: BAM5036_2400
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Entry
BAM5036_2400 CDS
T02480
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
baml
Bacillus velezensis UCMB5036
Pathway
baml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
baml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BAM5036_2400 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baml03400
]
BAM5036_2400 (recD)
Enzymes [BR:
baml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BAM5036_2400 (recD)
DNA repair and recombination proteins [BR:
baml03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BAM5036_2400 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
HHH_5
AAA_22
UvrD_C
AAA_12
AAA_16
nSTAND3
DEAD
T2SSE
AAA
NTPase_1
AAA_18
Zeta_toxin
AAA_28
AAA_17
Rad17
TsaE
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CCP22431
LinkDB
All DBs
Position
complement(2580490..2582868)
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AA seq
792 aa
AA seq
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MDQLNIEEQPYVKGVIHTVIYHNDTNLYTVLKVKVAETSEAIEDKVVSVTGYFPLLQEDE
TYTFYGKTATHPKFGLQFQAEHFKKEIPTTKEGIIHYLSSDLFEGIGKKTAEEIVKKLGD
GALNKILTDASVLYDVPKMSKKKADKLAGELQRHQGLEQIMISLNQYGFGPQLSMKIYQA
YETETLEKIQENPYQLVKDVEGIGFVKADELGGKMGLSGNHPERIKAAILYTIESTCLSE
GHTYIETKQLIINTQTLLNQSAEGGRVTEMDAADGIIALGESKDIVIEGERCYFPSLYYA
EQNVAKRVLDIAAQTEYADQFPESEFLLALGELEERMNVQYAPSQKDAIQKALSSPMLLL
TGGPGTGKTTVIKGIVELYSELHGVSLDPGDYKKDETFPVLLAAPTGRAAKRMSESTGLP
AVTIHRLLGWNGAEGFTYNEDQPIEGKLIIIDEASMLDIWLASHLFKALPKHIQLIVVGD
EDQLPSVGPGQVLRDLLASEVLPTVRLTDIYRQAEGSSIVELAHDMKKGLLPKGLTAPTK
DRSFIRCNSSQIKEVVDQVVSNALKKGYTSRDIQVLAPMYRGKAGINELNMLLQDIMNPP
KEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGDIGEIVSIFYAKENTEKEDMVVVSFD
GNEITFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITRAKKF
LILCGEEEALEWGVKNNDATVRQTSLKNRLTEQTEEMDAELAALQKELPFSVYDANIGME
GITPFDFMEEKA
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
gtggatcagctgaacatcgaagaacagccgtatgtaaaaggcgtcattcatacggtcatt
tatcataatgacaccaacctgtatacagtgctgaaagtcaaggttgcagaaacgtctgag
gcgatcgaagacaaggtcgtatccgtaacgggctacttccctctgctgcaagaagatgag
acctacacattttacggaaaaaccgccacgcatcctaagttcggcctgcaatttcaggct
gaacactttaaaaaagaaattccgaccacaaaagaagggatcattcactatttatcaagt
gatctgtttgaaggaatcggaaaaaaaacggcggaagaaatcgtcaaaaagctcggagac
ggcgcgctcaataaaattctgacggatgcatcggtgctttacgatgtgccgaaaatgtcg
aaaaagaaagcggataagcttgccggagagctgcagcggcatcaggggcttgagcagatt
atgatctctctgaaccaatacggtttcgggccccagctatccatgaaaatatatcaggcc
tacgaaacggaaacactggagaaaattcaggaaaatccttatcagcttgtaaaagacgtt
gaaggcatcggctttgtgaaagctgacgagctgggcggaaaaatgggtctgtcaggaaac
cacccggagcggatcaaagcggctatcttatatacaattgaatcgacctgtctttcagag
ggccatacgtacatagaaacaaagcagctgataatcaatacgcaaacgctcctgaatcag
tcagctgaaggcggccgcgtcacggaaatggatgcggctgacggcatcatcgccctcggg
gagagtaaggatatcgtcatagaaggagaacgctgctattttccgtccttgtattacgcc
gaacaaaatgtcgcaaaacgcgtgctcgacattgcggctcaaacggagtatgccgatcaa
tttcctgaatcggaatttctgcttgcactcggtgaactggaagaacggatgaatgttcaa
tacgcgccaagccaaaaggatgccattcaaaaagcgctgtcttcaccgatgcttttactg
accggaggacccgggacggggaaaacgaccgttattaaaggaatcgtggaattatacagt
gaactgcacggagtatcgcttgaccccggtgattataaaaaagacgagacgttcccggtg
ctgcttgccgcgccgacgggaagagccgcaaaacggatgagcgaatctacgggtctgccg
gctgttacgatacacaggctgctcggctggaatggcgctgaaggctttacctacaatgaa
gatcagccgatagaagggaaactgatcattatagacgaagcgagtatgctcgatatctgg
ctcgccagccatttgtttaaggcgcttcctaagcacattcagctcattgtcgtcggtgat
gaagaccagcttccttcagtaggaccggggcaggtgctcagagaccttttggcttctgag
gtgctgccgaccgtgcgcctgacagatatttaccgtcaggctgaaggatcatccattgtg
gaacttgcgcatgatatgaaaaaaggactgcttccaaaggggctgaccgcgccgacaaag
gaccgctcatttatccgctgtaattcttcacagattaaagaagtcgtagatcaggtcgtc
tcgaacgcgttaaaaaaggggtatacctccagggatattcaagtgctggccccgatgtac
aggggaaaagcgggaattaacgagctgaatatgcttcttcaagacatcatgaatccgccg
aaagaaaaaaggcgggagctgaaattcggtgatgtcgtctacaggacgggcgataaaata
ttacagcttgtcaaccagccggaaaacaatgtgtttaacggcgatatcggcgaaatcgta
tccattttttatgccaaagaaaatacggaaaaagaagacatggtcgtcgtctcgtttgac
ggcaatgaaatcacctttacgaaaaaggatttcagccagtttacccacgcgtactgctgt
tccattcataagtcgcaggggagcgaattcccgattgtcgtcctgcctgtcgtcaaaggc
tactatcgaatgctcaggagaaatctgctttataccgccattacaagggcgaaaaaattt
ctgattctttgcggagaagaagaagcgcttgaatggggcgtcaaaaacaatgatgccacc
gtcagacagacgtcgcttaaaaacaggctcacagagcagactgaagagatggatgcagaa
ctggccgccctgcaaaaagagctgccgttcagtgtatatgatgcaaacatcggaatggaa
ggcatcacgccgtttgactttatggaagaaaaagcgtaa
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