Bacillus velezensis AS43.3: B938_13505
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Entry
B938_13505 CDS
T02382
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bamp
Bacillus velezensis AS43.3
Pathway
bamp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bamp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B938_13505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bamp03400
]
B938_13505
Enzymes [BR:
bamp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
B938_13505
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
B938_13505
DNA repair and recombination proteins [BR:
bamp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B938_13505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DZR
Motif
Other DBs
NCBI-ProteinID:
AFZ91711
LinkDB
All DBs
Position
complement(2788724..2789560)
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AA seq
278 aa
AA seq
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MPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK
FLLFHLDHYVMVSHLRMEGKYGLHQADEPDDKHVHVVFHMTDGTQLRYRDVRKFGTMHLF
APGEEQNALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQKAVVGLGNIYVDEA
LFRARIHPETKANSLSDGQIKTLHTEIKDTLQEAIDAGGSTVRSYINSQGEIGMFQLKHY
VYGKKDEPCKTCGTMISKIVVGGRGTHFCARCQKKIIN
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaattaccagaagttgaaacggtccggcgcactctgaccggtcttgtgaagggg
aaaacgattgaatcggcggatatcagatggccgaatatcatcaaaaaacccgccgagccg
gaggaattcgcgcggcagattgcaggagaaacaatccgatccatcggaagaagggggaag
tttttgcttttccatctggatcattatgtcatggtgtcccacctgcggatggaggggaaa
tacggtcttcatcaggccgatgagcctgacgataaacatgtgcacgtcgtgtttcacatg
acggacggaacacagctccgctaccgggatgtccggaaattcggcacgatgcatttgttt
gcgccgggagaggaacagaatgcattaccgctttcacagctcgggcccgaacccgatgat
gaagcatttaccgctgcttatttaaaagagcggcttgcaaaaacgaaccgcgcagtgaaa
acagccctgctcgaccaaaaagcggtcgtcggcctcggcaatatttatgtcgatgaagct
ttattccgggcgcgtattcatcctgagacaaaagcgaacagtctgtcagacgggcagata
aaaacgcttcatacagaaattaaagacacccttcaggaagcgattgacgcgggcgggagc
accgtccggtcttatatcaattctcaaggggagatcggaatgtttcagctcaaacattac
gtatacggcaaaaaggatgaaccgtgcaaaacgtgcggcacgatgatttctaaaatcgtg
gtcggcggaaggggtacgcatttttgcgcccgctgccaaaaaaaaatcataaactga
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