Bartonella apis: BBC0122_001290
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Entry
BBC0122_001290 CDS
T05086
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bapi
Bartonella apis
Brite
KEGG Orthology (KO) [BR:
bapi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bapi03016
]
BBC0122_001290
Enzymes [BR:
bapi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BBC0122_001290
Transfer RNA biogenesis [BR:
bapi03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BBC0122_001290
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
AQT46269
UniProt:
A0A1U9MEY3
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All DBs
Position
140731..141285
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AA seq
184 aa
AA seq
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MPRLFAALEVPHDAALSLSLLRGGLPGARFIEVEDYHITLRFFGDMSNQMADELLEKLDH
IKRKPFSLRLKGIDVFGSKTPHSIYASVEPCEELLLLQSDIDRIAKRLGLKSDKGKYIPH
VTVARLKQVKLDDLLPYLSSHGHFETGYFPVNRFVMMSSHESIGGGPYIVEEHWQLDRQP
SSFE
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgccccgactttttgccgcattggaagtgccgcatgatgccgcattgtccttgtcactg
ttgcgaggcggtttacctggtgcgcgtttcatcgaagtcgaggattatcatatcaccctg
cgcttctttggtgacatgagcaatcagatggctgatgaacttttagaaaaactcgatcat
attaaaagaaagccattcagccttcgcctcaaaggcattgatgttttcggttcaaaaaca
ccgcattcgatttatgcaagtgtagaaccatgtgaggaactcttgcttttacaaagcgac
attgatcgtattgccaaaagacttgggctcaaatcggataaaggaaaatatattcctcac
gtgacagttgctcgcctcaaacaggtgaagcttgatgatttattgccctatctttcttca
catggccattttgaaacggggtattttccggttaaccgctttgtgatgatgtcttcacat
gagtcaattggcggcgggccttatattgttgaagagcattggcagctcgaccgacagcct
tcctcttttgaatga
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