Burkholderia arboris: NLX30_33875
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Entry
NLX30_33875 CDS
T08608
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bari
Burkholderia arboris
Pathway
bari02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bari00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NLX30_33875 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bari03021
]
NLX30_33875 (rpoD)
Transcription machinery [BR:
bari03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NLX30_33875 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GerE
Motif
Other DBs
NCBI-ProteinID:
UTV58068
LinkDB
All DBs
Position
pla_1:complement(3479495..3481912)
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AA seq
805 aa
AA seq
DB search
MAKTTGGKKATGKGSTEPTKKVTAAKSASSTRTTSSATSAPAGKKTAAGTAQAAPAPAAR
TRAAARPDSGPAKPAAKRASAKSARDTTADADETAVRTTHAPTVQPAVVQQPRVDIAGTA
NSMTKKLNEVSVEDDANQSDEQPAAAAAPGKSKVRDRRAKEKALLKEAFATSTPGTAEEL
EERRVKLRALIKLGKERGFLTYAEINDHLPDNFTETEALEGIIGTFNDMGVAVYEQAPDA
ETLLLNDNAPAASSDDEVEEEAEVALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIE
IAKRIEDGLRHMVMAISACPTTIADILAMAERVANEEIRVDELVDGLLDPNASDSADTDG
FSAKEAEAIENENEEAEEEEEEEEEEEDDGAAQASANAAQLEALKRASLDKFSQISEWFD
KMRRAFEKEGYKSKAYLKAQETIQTELMTIRFTARTVERLCDTLRAQVDEVRQVERQILH
IVVDKCGMPRSEFIARFPGSETDLDWSEKIMAEGHSYSAVLSRNVPAIREQQQRLLDLQA
RVVLPLKDLKETNRQMAAGELKARQAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGN
IGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQ
ILQETGLEPDPATLAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDNNTV
APADAALHASMRDVVKDVLDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQ
IEAKALRKLRHPSRSDKLKSFLEGN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagacgacaggcggaaagaaagcaacaggcaagggctcgacggagccgaccaag
aaggtcacagcggccaagtctgcttcttccaccaggacaacgtcttcagccacgtcagcc
cctgcaggaaagaaaaccgcggccggcactgctcaggctgcgccggcgccggcagccaga
acacgggctgccgccagacccgactccgggccggccaagccggcggcgaagcgggcaagt
gcgaaaagcgcaagggacacgactgccgacgcggacgaaacggcagtacgtactactcat
gcacccacggttcaaccggctgtcgtccagcagccgcgagtcgatatagccggtacggcg
aactccatgaccaaaaagctgaacgaagtatccgtcgaagacgacgcaaatcagagcgac
gagcagcccgcagccgcggctgcaccgggcaaatccaaggtgcgcgatcgtcgcgccaag
gaaaaggcgctgctgaaggaagcgtttgcgacgagcacgccgggcacggccgaggagctc
gaagagcgccgcgtgaaactgcgcgcgctgatcaagctcggcaaggagcgcggcttcctg
acgtacgccgaaatcaacgaccacctgccggacaacttcaccgagaccgaagccctcgaa
ggcatcatcggcacgttcaacgacatgggcgtggcggtttacgagcaggctccggacgcg
gaaacgctgctcctgaacgacaacgcgcccgccgcgtcgtcggacgatgaagtcgaagag
gaagcggaagtcgcgctgtccaccgtcgattcggaattcggccgcacgaccgatccggtc
cggatgtacatgcgcgaaatgggcacggtcgagctgctcacgcgcgaaggcgaaatcgag
atcgcgaagcggatcgaggacggcctgcgccacatggtgatggccatctccgcatgcccg
acgacgatcgccgacatcctcgcgatggccgaacgcgtcgcgaacgaagagatccgcgtc
gacgagctcgtcgacggcctgctcgatccgaatgcttcggactccgccgacaccgacggc
ttctccgcgaaggaagcggaagccatcgagaacgagaacgaggaagccgaagaggaagag
gaagaagaggaagaggaggaggacgacggtgccgcacaggcatcggcgaacgccgcccag
ctcgaagccctcaagcgtgcgtcgctcgacaagttctcgcagatcagcgagtggttcgac
aagatgcgtcgcgcgttcgagaaggaaggctacaagtcgaaggcctacctgaaggcgcag
gaaacgatccagaccgaactgatgacgatccgcttcaccgcgcgtaccgtcgaacgcctg
tgcgacacgcttcgtgcgcaggtggacgaagtgcgtcaggtcgagcgccagatcctgcac
atcgtcgtcgacaagtgcggcatgccgcgttcggaattcatcgcgcgcttcccgggcagc
gagacggatctcgactggtccgagaagatcatggccgaaggccattcgtacagcgcggtg
ctgtcgcgtaacgttccggcgatccgcgaacagcagcagcgcctgctcgacctgcaggcg
cgtgtcgtgctgccgctgaaggacctgaaggaaaccaaccgccagatggcggccggcgaa
ctgaaggcgcgccaggcgaagcgcgaaatgaccgaggcgaacctgcgtctcgtgatctcg
attgcgaagaagtacacgaaccgcggcctgcagttcctcgacctgatccaggaaggcaac
atcggcctgatgaaggcggtggacaagttcgaataccgtcgtggctacaagttctcgacc
tacgcgacgtggtggatccgtcaggccatcacgcgttcgatcgcggaccaggcgcgcacg
atccgtattccggttcacatgatcgaaacgatcaacaagatgaaccgcatctcgcggcag
atcctgcaggaaaccggtctcgagccggatccggcaacgctcgccgagaagatggagatg
ccggaagacaagatccgcaagatcatgaagatcgcgaaggagccgatctcgatggaaacg
ccgatcggtgacgacgacgattcccatctgggcgacttcatcgaggacaacaacacggtc
gcgccggcggatgcagcgctgcatgccagcatgcgcgacgtcgtgaaggacgtgctcgat
tcgctgacgccgcgcgaggcgaaggtgctgcggatgcgtttcggtatcgagatgagcacc
gaccacacgctcgaggaagtcggcaagcagttcgacgtcacgcgcgagcggatccgtcag
atcgaggccaaggcgctgcgcaagctgcgtcacccgagccgctccgacaagctgaagtcg
ttcctcgaagggaactga
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