Bartonella sp. JB63: BJB63x_007980
Help
Entry
BJB63x_007980 CDS
T05552
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
barj
Bartonella sp. JB63
Pathway
barj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
barj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BJB63x_007980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
barj03019
]
BJB63x_007980
Enzymes [BR:
barj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BJB63x_007980
Messenger RNA biogenesis [BR:
barj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BJB63x_007980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
UTP25
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AQX29472
LinkDB
All DBs
Position
complement(881066..882313)
Genome browser
AA seq
415 aa
AA seq
DB search
MSISKKNVFAELGLSSLLVKNLFTAGIRKPKLIQAQAIPVMLKGHDILGIAQTGSGKTLA
FSLPILNRILTLGDKRHPKTARALILVPTRELAVQIEEAISAIAKGTHLSNCLILGGMSR
LAQIKRMAKGVDILIATPGRLMDLIRSKYIDLSQSRFFVLDEADRMLDMGFINDVRQIAN
FLHKKCQTALFSATMPKEINVLADNLLKEPVKIEVVPQGTTAVEITQILYCVSTSEKKSV
LSKLLTNPALALVIVFIRTKHGADSVARSLEKAGYSVATIHGNKSQNVRQCALKNFREGL
VRVLVATDIAARGIDIPGISHVINYDLPDNAESYVHRIGRTGRNGASGNAITLFDEKVER
ARLSAIERLIRIKLIRKEIPPQFAVLPEKPTEPTTHEQEVNKKYHFKKSKVRKKT
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
ttgagtataagtaaaaaaaatgtttttgcagagctaggtttatcatctcttttagttaaa
aacctatttactgctggtattagaaaacctaaacttattcaagcacaagctatcccagta
atgttaaaaggacatgatattttagggattgcacaaactggttcgggaaaaacattggca
tttagtttacctattttgaaccgaattttaactttaggtgataaacgtcatcctaaaact
gcacgagctttaattttggttcctacacgtgaacttgctgttcagattgaggaagcaatt
agtgctattgcaaagggaactcatctttcaaattgtttgattttgggtggaatgtcgcgt
ttggcacaaattaaacggatggcaaaaggtgtggatattttgattgcaacacctggacgt
ttaatggatcttatccgtagtaaatatattgatctttctcagtcacgtttttttgttcta
gatgaagctgatcgtatgttagatatgggttttattaatgatgtgcgacaaattgcaaac
tttctgcataaaaaatgtcagacagcgcttttttctgcgacaatgccgaaagaaattaat
gtccttgcagataatttacttaaggaaccggtaaaaatagaggttgttcctcaaggaacc
actgctgtagaaattactcaaatactgtattgtgtttctacaagtgaaaaaaagagtgtt
ttaagtaaacttttgacaaatcccgctttagctttagttattgtgtttatacgtactaaa
catggggctgattctgttgcgcgtagtttggaaaaagcaggatattctgttgcgacaatc
catgggaataaatcgcaaaatgttcggcaatgtgcgttaaaaaattttcgtgaaggattg
gtaagagttttggttgcaactgatattgctgcacgtggtattgatataccaggaattagc
catgttattaattatgatttgccagataatgctgaaagttatgtgcatcgtattggtcgt
acaggacgtaatggtgcatctggtaatgctattacgctttttgatgaaaaggtagaacgc
gcacgtttgtctgctatagagcgcttgattcggataaaattaatacgcaaagaaattcct
cctcagttcgcagtattgccggaaaaaccaactgaaccaacaactcacgagcaagaagtt
aataagaaataccattttaaaaaatctaaagttaggaaaaaaacttga
DBGET
integrated database retrieval system
