Bartonella sp. WD16.2: BWD162_000610
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Entry
BWD162_000610 CDS
T05203
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
barw
Bartonella sp. WD16.2
Pathway
barw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
barw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BWD162_000610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
barw03400
]
BWD162_000610
Enzymes [BR:
barw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BWD162_000610
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BWD162_000610
DNA repair and recombination proteins [BR:
barw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BWD162_000610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
BTH_I2711-like
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
AQX19201
UniProt:
A0A1S6WSB0
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All DBs
Position
63417..64292
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AA seq
291 aa
AA seq
DB search
MPELPEVETVRRGLEPVLIGAQIISVTLNRKNLRFPFPEEFSKKLVGRKIVKLDRRAKYL
LFHLSQNETILGHMGMSGTWRIEGRLLKKEYASMGKLVAHDHFIMDVRAKDSNVYRIIYN
DARRFGFMLLINTIKLDEHPLLKKLGVEPVEDALSSSYLQKAFINKKTSLKTALLDQSII
AGLGNIYVCEALWRSRLSPQRSAFTLALKSARAYEFANRLAQNICAVISEAIIAGGSSLR
DYVHTDGSLGYFQHNFSVYGREGKECLQCGVPIVRILQAGRSSFYCPKCQK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacttcctgaagtagaaacagttcgtcgtgggcttgaaccagttttgattggt
gcacagattatatctgtaacacttaatcgtaaaaatttgcgatttccttttccagaagag
ttttctaagaagcttgtaggtagaaagattgtaaaacttgatcgacgtgcaaaatattta
ttgtttcacctctcacagaatgaaacaattttaggtcatatgggaatgtcaggaacgtgg
cgcatagaaggtaggcttttaaaaaaagagtacgcttctatgggtaaattagttgcacat
gatcattttataatggacgttagagcaaaagatagtaacgtttaccgtatcatttataat
gatgctcgtcgttttggttttatgcttttaataaacacaataaagcttgatgaacacccg
cttttaaagaaattaggggttgaacctgtggaagatgcgctttctagttcttatttgcaa
aaggcttttatcaataagaaaacatctcttaaaactgctttgcttgatcagtctattatt
gcaggacttgggaatatttatgtttgcgaagcgctttggcgtagccgtttatctccacag
cgtagtgcgtttacattggcattaaagagcgcgcgtgcatacgaatttgcaaatcgtttg
gcacaaaatatatgtgctgtgatttctgaagcgataattgctggtggatcttctttacgt
gattatgtacatacagatggttcacttggttatttccagcacaatttttcggtttatgga
cgagaaggaaaggaatgtttgcaatgtggggtacctattgtacgtattttgcaggctggg
cgctcaagcttttactgcccaaagtgtcaaaaatga
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