Bdellovibrio bacteriovorus HD100: Bd0964
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Entry
Bd0964 CDS
T00159
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bba
Bdellovibrio bacteriovorus HD100
Brite
KEGG Orthology (KO) [BR:
bba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bba03032
]
Bd0964 (topA)
03400 DNA repair and recombination proteins [BR:
bba03400
]
Bd0964 (topA)
Enzymes [BR:
bba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Bd0964 (topA)
DNA replication proteins [BR:
bba03032
]
Prokaryotic type
DNA Topoisomerases
Bd0964 (topA)
DNA repair and recombination proteins [BR:
bba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Bd0964 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
CAE78902
UniProt:
Q6MP96
LinkDB
All DBs
Position
909726..912455
Genome browser
AA seq
909 aa
AA seq
DB search
MAKKSDATDGIKLVIVESPTKAKTIRKFLGRDYVVESCMGHIRDLPQSAKDIPEKVKKEK
WAQLGVNVDKNFEPLYCVPKDKTKVVKNLKDKLEEASELYLATDEDREGESISWHLLEVL
KPKVPTKRMVFHEITKDAIQKALKDTREIDFNLVRAQEARRVLDRLVGYTISPLLWKKVA
YGLSAGRVQSVAVRLIVERELERVRFKKSSYWGVLAELSKDGVSFESRLQQYKNQRVATG
KDFDGLTGQLTAGKDVLVLDEKTAGKLSMDLKSGNWQVTDVEEKPTFRKPAPPFITSTLQ
QESNRKLGLSSRETMQVAQKLYEQGFITYMRTDSTFLSNEAITASRDCIESKYGKEYLTP
QPRNYAAKKVKGAQEAHEAIRPAGNQFMDPDETGLTGTQFRLYDLIWKRTIASQMVDARQ
KQVSAKITVGDALFGASGMTIEFPGFLRAYVEGSDDPEADLAEREVRLPALKVKDGVKCA
KLDPTSHETKPPARYTEASLVQTMEKEGIGRPSTYASVIGTIIDRGYVRKNGTALVPTFT
AMIVSKLLSQYLSQYVDLGFTSEMEQSLDNIADGELDWESYLASVYKGPKGLRAMVDNQG
DKIDPNEARTMTLEGMDKYKFHVGRYGAYVTTQRDGEDVSASLPDNESPADITPEIAEKL
IDQKINGADSLGNDPETDLPVYVLNGRYGPYVQLGDVTPEDDKPKRASLPPGTQPEQVDL
AMALSLLQLPKTLGTHPGTGKDIKAGLGRFGPFVVHDGDYRSIPKGESIFNITFEKAMEM
LAQPKKGRGRAAPLKELGAHPDSGDAIQVFNGPYGPYIKCGKVNASLPEGATPDTVTLEQ
AVALINEKGPAKGKGKAKGKAKAAPKAKAAKADGEKPAAKKPALKKAANAKEKAEALGVK
KVVTRKSKK
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaaaagtgacgcaacagatggtatcaagcttgtcatcgtggagtctcccacg
aaggcaaagaccattcgcaagttcctgggaagagattatgtggtggagtcctgcatgggc
cacatccgtgaccttcctcagtccgcaaaagacatcccggaaaaggtgaaaaaagaaaag
tgggcgcaactcggcgtgaacgtcgataaaaacttcgagcccctttactgtgttcccaag
gacaaaaccaaggtcgtcaaaaacctgaaagacaaacttgaagaagcctcagagctgtac
ctcgcgacggatgaagaccgcgaaggggaatccatcagctggcatttgttggaagtgcta
aaaccaaaagttccaaccaagcgcatggtgttccatgagatcaccaaagacgcgattcaa
aaagccctgaaagacacccgtgagatcgacttcaacctggtgcgcgcccaagaggcccgc
cgtgttctggatcgtttggtgggttacacgatttctccgctactctggaagaaggtagct
tacggcctttctgcgggccgcgttcagtccgtggcggtgcgcctgatcgtggaaagagaa
cttgagcgcgtgcgctttaaaaagtcctcttactggggtgtgcttgcggaactgagcaaa
gacggtgtcagctttgaatcccgtctgcagcaatacaaaaatcaacgtgtggccaccggt
aaggacttcgacggtctgaccggtcaactgacggcaggtaaagacgttctggttctggat
gaaaagactgcgggcaagttgtccatggatctgaaatccggcaactggcaggtgacggat
gtcgaagaaaaaccgaccttccgtaaaccagcgcctccgttcatcacgtccactttgcag
caggaatccaatagaaaattgggtctaagctcgcgtgaaaccatgcaagtggcgcagaaa
ctgtacgaacagggtttcatcacctatatgcgtacggattccacattcctttccaacgaa
gctatcacggcttcccgtgattgcatcgaaagcaagtacggaaaagagtatctgactccg
cagccgcgcaattacgccgcgaaaaaagtcaaaggcgcccaagaggcccacgaagcgatc
cgtcctgccgggaaccagtttatggatccggatgaaacaggtctgaccgggactcagttc
cgtctgtatgacctgatctggaaacgtacgattgcgtcccagatggtggatgcccgtcag
aaacaagtcagcgccaaaatcaccgtgggtgatgcgttgtttggggcttccggtatgacc
attgaattcccgggcttcttgcgagcgtacgtggaaggcagtgatgatccagaagcagat
ctggctgaacgtgaagtgcgtctgccggctttgaaagtcaaagacggtgtgaagtgcgcg
aaactggatcccacatcccacgaaaccaaaccaccggctcgttatacagaggcaagcctt
gttcaaacgatggaaaaagagggcatcggccgtccgtccacgtacgcttctgttatcgga
actatcattgaccgtggttatgttcgtaagaacggaacggcattggtgccgacgttcacg
gcgatgatcgtttctaaattattaagtcagtatttgtcccagtatgtggatttgggcttc
acttccgaaatggaacagagcctggataatatcgccgacggggaactggattgggaaagt
taccttgcgtccgtgtacaaaggccctaagggcttgcgtgccatggtcgacaatcaaggt
gacaagattgatccaaacgaggcccgtacaatgactttggaaggcatggataaatataaa
ttccacgtcggccgttacggtgcttatgtgaccactcagcgtgacggtgaagacgtcagc
gcgtccttgccggacaatgaatctccggcggatatcacgcccgagatcgcagaaaaactg
atcgaccaaaaaatcaacggggcggattctttggggaacgacccggaaacagatctgccg
gtgtatgttctgaatggccgctatggtccttatgttcagttgggggacgtgactccggaa
gacgacaagccgaaacgtgcgtcgttgccgccgggcactcagccagaacaggtggatctg
gcaatggcgctcagcctgttgcaattgccaaagaccttggggactcacccgggcacgggc
aaagacatcaaagcgggcttgggtcgttttggtccgttcgtggttcacgacggcgactat
cgttcgattccaaaaggtgaaagcatctttaatatcacctttgaaaaagccatggagatg
ctggctcagcctaaaaagggacgtggtcgtgcagctccattgaaagagctgggcgcgcat
ccggattcaggcgatgcgattcaggtcttcaatggtccttacggtccgtacatcaagtgc
ggcaaggtcaatgcgtctttgccagagggtgcgacgccagacacggtgaccctggagcaa
gctgttgctttgatcaatgaaaagggcccggcaaaaggcaaaggtaaagctaaaggaaag
gcgaaagctgctccgaaagccaaagccgctaaagctgatggcgaaaagcctgctgcaaaa
aagcccgctttgaagaaagctgctaacgccaaagaaaaagccgaagctttgggtgtcaaa
aaagtagtcactcgcaagtccaagaagtaa
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