Bdellovibrio bacteriovorus HD100: Bd1228
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Entry
Bd1228 CDS
T00159
Symbol
amyX
Name
(GenBank) pullulanase
KO
K01200
pullulanase [EC:
3.2.1.41
]
Organism
bba
Bdellovibrio bacteriovorus HD100
Pathway
bba00500
Starch and sucrose metabolism
bba01100
Metabolic pathways
bba01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Bd1228 (amyX)
Enzymes [BR:
bba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.41 pullulanase
Bd1228 (amyX)
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Gene cluster
GFIT
Motif
Pfam:
Pullul_strch_C
CBM_48
Alpha-amylase
Pullulanase_N2
DUF6835
Motif
Other DBs
NCBI-ProteinID:
CAE79132
UniProt:
Q6MNL9
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All DBs
Position
complement(1165222..1167885)
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AA seq
887 aa
AA seq
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MKSFRFCSLLLICSFVLSCTLLLGQIAEAKAPARAQWVDNSRIVFRLPQGFRVHQNLLFS
LGERISLHQQDSILLPVIRTDSSHVELSTQHLSSTQIDQLIRRPLRLFVSNKNGQILDST
ALQYSGILDQMYFYDGDDLGAHVRSTSVGVKLWAPTARNVELLLYKDAQDTNPAAVLPMS
RQQGVWFADLPGKYVNYFYLYQVEAYQPLSDQVETHTVTDPYSFSLTADGAKSQIVNLND
SSLKPQGWDRLHKPALRSFNDIVIYELHIRDFSVADFTVPFPYRGGYEAFAQTNSESSKY
LQSLADAGMTHVHLLPFNDFGSVPENKDAWENYDSESSDLQEAQAYLGRIKAKDPFNWGY
DPVHFMTPEGSYATDPNGSRRVYETRNMVQALNKMNLRVVQDVVFNHTYEAGLEPYSVFD
KIVPLYYYRVNDEGDIQKSSCCNDTASEHRMMEKLMIDSVLHWARTYKIDAFRFDLMSFH
SRNTMEKIKSELRGLTEREDGIDGSKIYLYGEGWAFGSFYDRYPAESLHMLNSYGSGYGF
FNDRLRDAVRGGTTNSAEKSDQGFATGLYFDFNKEPANRNTPTDINGQREKLLHLGDVIK
AGLAGNLRDFKFKEHWGSFVTAGQLHYRGAPTGTSAEALETVSYVSAHDGYTLWDAVQAK
APFYTNGRFPSLSKSEDRQRMHQLALALPMLSQGIPFIESGSELLRSKNGDQDSYNSGDF
FNRIDWSRQQNFWGAGLPPAWKNVEDWSFWQPRLQEPGMKVTPELITRTEKYFKALLRVR
QSSNLFKLNDLSEIQKSLTFIDNDKQTEPGLIAMHLQSSSEKLLIFFNAAREARSFEHRV
LGQNWELHPLLDEKVDATLSQVLLAPSDKRIQIPGRSTVILIQKAGH
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
ttgaagagcttccgcttttgttcactactattgatctgcagcttcgtactttcttgcaca
cttttgctgggacaaattgctgaagccaaagcccctgcccgcgcccagtgggtggataac
tcgcgcattgtttttcgtctgccacaaggcttccgtgttcaccaaaatcttttattttca
ctcggagaacgcatctcactgcaccagcaggactccattcttctgccagtgattcgcacc
gactcttcccacgttgaattgagcacgcagcatctttcctccacgcaaattgatcagctg
atccggcgtccattgcgtctttttgtatccaataaaaatggccaaattctggattccacg
gctttgcaatattccgggattctggatcaaatgtacttctatgacggcgatgatctgggc
gcacatgtgcgttccacgagtgtcggcgtaaaactatgggcgcccaccgcacgcaatgtt
gaattgttgctatataaggatgctcaagatacgaatccagcagccgttctgccgatgagc
cgccagcaaggcgtatggttcgcggatcttcccggaaaatacgtcaactatttctatctt
taccaagtggaagcgtatcagccactgagcgatcaggttgaaacccacacggtcacagat
ccttacagcttcagcctgacggccgacggagccaagtcccaaatcgtaaatctgaatgat
tcctctctgaagccgcaaggctgggatcgtttgcataagcctgctcttcgttctttcaac
gacatcgtaatttatgaactgcacatccgtgatttcagcgtggctgatttcaccgtgccg
ttcccatatcgtggtggctatgaagctttcgcacaaaccaactccgaaagctcgaagtac
cttcaatctttggcagacgccgggatgacccacgtgcatttgctgccgttcaatgacttt
ggttcggttccggaaaacaaagacgcttgggaaaactacgattccgaaagttccgacctg
caagaagcgcaagcctatcttggtcgcatcaaagccaaagacccgttcaactggggttat
gatccggtccactttatgacccctgagggcagttatgccacggatcctaacggatcacgc
cgcgtttatgaaacccgcaacatggtgcaggcactaaataagatgaacctgcgagttgtt
caggacgttgtatttaatcacacctatgaagcaggtctggaaccctactctgtctttgat
aagatcgtgccgctttattactaccgagtgaatgacgagggtgacattcaaaaaagctcc
tgctgcaacgacaccgccagcgaacatcgcatgatggaaaagcttatgatcgacagtgtg
ctgcactgggcacgcacctataaaatcgacgccttccgctttgacctgatgtccttccat
tcccgcaacaccatggagaaaatcaaatccgaattgcgcggcctgacggaaagagaagac
ggcatcgatggatccaaaatctatctgtacggcgaaggctgggcgtttggttccttctat
gaccgctatccagcggagtccctgcacatgctgaattcctatggcagcggctatggattc
ttcaacgaccgtctgcgcgacgctgttcgtggaggcacgaccaattccgctgaaaaatcc
gaccaggggtttgcgacggggctttattttgatttcaacaaagaacctgccaatcgcaac
actccgaccgatatcaacggccagcgcgaaaagcttttgcatctgggtgatgtgattaaa
gcgggccttgcgggcaaccttcgtgatttcaaattcaaagaacactggggctcattcgtg
actgcaggacaactgcactatcgtggggcgccgaccggcaccagtgccgaagcgcttgaa
actgtcagctatgtgtccgcccatgacggttacactttgtgggatgccgttcaggccaag
gcaccgttctataccaacggacgtttcccttctttgagtaaatcggaagaccgccagcgc
atgcatcagttggccctggcattgccgatgctaagtcagggtattccgtttattgaatcc
gggtctgagcttttgcgcagtaaaaatggcgatcaggacagttacaattcgggggatttc
tttaatcgtatcgactggagccgtcagcagaacttctggggcgcaggactgccacccgcg
tggaaaaacgtggaggactggtctttctggcaaccacgcctgcaggaacccggcatgaaa
gtcacgcctgagctgatcacccgcacagaaaagtacttcaaagccctgctgcgtgtccgt
caaagttctaacctgttcaaactcaacgatttgtccgagattcagaagtctttgaccttt
atcgataacgacaaacaaaccgagccgggtttgattgcgatgcacctgcagtcgtcctcg
gaaaaacttttgattttcttcaacgccgctcgcgaagcccgcagcttcgaacaccgagtc
ttaggccagaactgggaactgcatccgctgctggatgaaaaagtcgacgcgactctgtca
caggttctgctggccccttctgacaaacgcattcaaatcccgggtcgcagcaccgtgatt
ctaattcagaaagccggtcactga
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