Brevibacillus brevis: BBR47_36590
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Entry
BBR47_36590 CDS
T00879
Name
(GenBank) conserved hypothetical protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
bbe
Brevibacillus brevis
Pathway
bbe03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BBR47_36590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbe03400
]
BBR47_36590
Enzymes [BR:
bbe01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
BBR47_36590
DNA repair and recombination proteins [BR:
bbe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BBR47_36590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
Motif
Other DBs
NCBI-ProteinID:
BAH44636
UniProt:
C0ZFS7
LinkDB
All DBs
Position
3841615..3842517
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AA seq
300 aa
AA seq
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MCPATKEYELTIDNHTLSITNPDKPLWPEAEVTKLDYLRYLLIVAAPLLRYSKDRLLTVI
RYPHGIGDKHFYQKNAPDYAPDWIQTHMWENVRYVLCNDRATLVWMANQAALEWHVSFHL
AKDETPTELVFDLDPSTDDFAVVIESALLLKQLLNELQLPSWVKTSGSSGLQIYVPIELR
YTFEQTRQVGHFIASYLVSKHPSLLTIERLVKNRGDKLYIDYLQHWRGKTLPAPYSTRAK
EQATVSTPLLWEEVPHSHPTDFTVYTVPKRLETFGDLFSSISAPTKRASLDAILGFLQCQ
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
ttgtgtcctgcaacaaaagagtacgagctgacgatcgacaatcacacattgtccatcaca
aaccctgacaagcctctttggccagaggccgaggtaaccaagctagattacttgcgctat
ttgctgattgttgcagccccactactccggtatagcaaggatcggctcttaaccgtcatt
cgctaccctcacggaatcggtgacaagcacttctatcaaaagaacgccccggactatgca
cccgactggatacaaacgcatatgtgggaaaacgtacgttacgtactgtgcaatgatcga
gcgacactcgtatggatggcgaatcaagctgcattggaatggcacgtctcctttcacctc
gccaaggatgagactccgacagagctcgtgtttgacctcgatccttccacagatgacttt
gctgttgtgatagagtctgccctcttattgaaacagctgctcaatgaattacagctgcct
tcatgggtcaagacatccggttccagtggcttgcaaatctatgttccgatcgagctccgc
tatacgtttgaacagacgcgccaagtcggacatttcatcgcatcctatttagtcagcaag
catccctcccttttaaccatcgagcgcttagtgaagaatcgaggtgataagctgtacatt
gactatttgcagcactggcgcggaaagacattaccagccccttattcaacccgtgcaaaa
gaacaggcaaccgtctcaacgccactcctgtgggaagaagttccccattctcatcccaca
gatttcaccgtttatacggtacccaaacgtctggaaacattcggagatttattttcctcc
atatctgccccgacaaaacgggcctctcttgatgccatcctcggctttttgcagtgtcag
taa
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