Branchiostoma belcheri (Belcher's lancelet): 109463394
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Entry
109463394 CDS
T07532
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 4-like
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109463394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbel03000
]
109463394
03019 Messenger RNA biogenesis [BR:
bbel03019
]
109463394
04121 Ubiquitin system [BR:
bbel04121
]
109463394
Enzymes [BR:
bbel01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109463394
Transcription factors [BR:
bbel03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
109463394
Messenger RNA biogenesis [BR:
bbel03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109463394
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109463394
Ubiquitin system [BR:
bbel04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109463394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
Torus
zf-C3HC4_2
zf-UDP
Nup35_RRM_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
109463394
NCBI-ProteinID:
XP_019615756
UniProt:
A0A6P4YFJ9
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MSSFGSNKGDDQLECPLCMEPLEMDDVNFFPCTCGYQICRFCWHRIRTDKNGLCPACRKQ
YPEDPAEFKPLSQEELQRIKNERKQKDLARKQKISESRKHLANVRVVQKNLVFVVGLSPR
LADPEVLKKHEYFGKFGKIHKVVINNNTSYAGAQGPSASAYVTFVRSEDALRAIQTVNNA
HVDGRTLKASLGTTKYCSHFLKGAQCQKPDCMYLHELGDEAASFTKEDMQMGKHQEYEQK
LLEDLYRSQSGQLSTPAPAATPAVEKNRLNNTEKSKANAASLPRKISPSPPTVQPTKGGP
TKDPWPTLQQTNKPNDRVIGSSANGIGGGQQATNQKPPDILRLQSDGQSNDPFHSNSKEI
LPPSLLPPLTPPKLGSPTQNSTHFKNPFEIGDLSQSLFSHNDFRRIPTVPPQPTQAVVPP
HIPPIEPPADQQGLGLSNDSLPVESTDTDWQAAFGFGTSSKQEDDLGFDPWDESAKALAD
LMEKELKTEAGGGRDEFPRGRDPQHHSMPNHFQQHYNNPSQLPPATSQLPPRYQANQAPP
FNSMAGSRMPFMGNFAPDASAQNNAPWMQYPQPGLPGFNPGFFDNFGNVNGPTLVRPPGF
GLSRDNASMNSDIDMKDWQEGLRSLLPNINIHFGPPMPPPHGSNSPPPLPPHQPQHNLPP
SHKWPPSQLQRQPPPPQQQQPPQQQQQQSVTQQPPFWLPDPAIITCTPTNPSNSVENSTG
LSESPPHWMKSLQALTEMDSPTTPHTPFMAQQQQQQQQQQQQQQPHFPSEAPHGQHKPPP
GFQPQNRPPAKPTEVPQTSSLDSH
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccttcggtagcaacaagggagatgaccaactcgagtgcccgctgtgcatggag
ccgctggagatggatgatgtcaacttcttcccctgcacgtgcggctaccagatctgccgc
ttctgctggcatcggatccgcacggacaagaacgggctctgccccgcctgtaggaagcaa
taccctgaggacccagcagagttcaagcccctgtcacaggaggagctgcagaggataaag
aacgagcgtaaacagaaggacctggccaggaaacagaagatctccgagagtaggaaacac
ctggctaacgtcagggttgtgcagaaaaacctggtcttcgtggtcgggctgtctccaaga
ctcgcagaccccgaggtgctgaagaaacatgagtactttgggaagtttgggaagattcac
aaagtggttatcaacaacaacacatcatatgcaggtgctcagggtcctagtgcaagtgcg
tacgtcacgtttgtccgttcggaggacgcgttgcgggcgatacagacagtcaacaacgcg
cacgtggacgggagaacgctgaaggcatcgctaggcacgacaaagtactgcagccacttc
ctgaagggtgctcagtgtcagaaacctgactgtatgtacctgcacgaactgggggatgag
gctgccagcttcaccaaagaagacatgcagatgggtaaacaccaggagtatgagcagaag
ttactggaggacctgtacaggagtcagtcaggacagctcagcacaccagcccctgccgcc
acacccgcagtcgagaaaaacagattaaacaacacggagaaaagtaaagctaacgctgct
tccctccccaggaaaatatccccctcccctcccaccgttcaacccacgaaaggcggaccc
acaaaagacccctggccaacgttacaacagaccaacaaaccaaacgacagagtcatagga
agcagtgcaaacgggataggcggggggcagcaagcaaccaatcagaaacctccagacatc
ctcagactgcagtccgacggccaatcaaacgacccgttccacagcaactccaaagagatt
ttacccccctccctcctcccccccctcaccccgcccaagctgggcagccccacacagaat
tctacacatttcaagaacccttttgaaatcggcgacctctcgcagtccttgttctctcac
aacgacttccgcagaataccgacggtccctccgcagcccacccaggccgtcgtgcctccg
cacatcccgcccatcgagcccccggccgaccagcaaggtctcgggctctccaacgacagt
cttccagtggaaagcacagacacagactggcaggccgcgttcgggttcggcacgtccagc
aaacaagaggacgacctggggtttgacccctgggacgagtcggcgaaggcgctggctgac
ctgatggagaaggagttgaaaacggaagcgggcggcggcagggacgagtttccccgcggc
agggacccgcagcaccactcgatgccaaaccattttcagcagcactacaacaacccgtca
cagctgcccccagccacgtcacagctcccgccccgctaccaggccaaccaggctccgccc
ttcaatagcatggcgggctccagaatgcccttcatggggaacttcgctcccgacgcctcg
gcgcagaacaacgcgccatggatgcagtacccacaacccggcctgccgggattcaacccc
gggtttttcgataactttgggaacgttaacggacccacgctggttagaccgcccggtttt
ggactgtcccgggacaatgcttcgatgaactcggacattgacatgaaagactggcaggag
ggattgagatcgttgctgccgaacataaacatccatttcgggccgcccatgccgccgcca
cacggtagcaactccccccctccactacccccccaccaaccacagcacaacctccccccc
tcacacaaatggcctccgtcacagttgcaacggcagccccctcccccacaacaacaacaa
cccccacaacaacaacaacaacagtctgttacgcagcagccgccgttctggttacctgac
ccagccatcatcacttgcacgcccaccaacccctccaactccgtagaaaacagcaccggc
ttgtcagaaagtccgccacactggatgaaatccctccaagcgctcacggaaatggattct
ccaacaaccccacacacacccttcatggcacaacaacaacaacaacagcagcagcagcag
caacagcagcagccacatttcccttcagaggccccacatggccaacacaagcccccgcca
ggatttcagccacagaacagaccaccagccaagccaacagaagttccacagacaagctct
ttggactcacactaa
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