Bifidobacterium bifidum BGN4: BBB_0245
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Entry
BBB_0245 CDS
T02135
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
bbf
Bifidobacterium bifidum BGN4
Pathway
bbf00470
D-Amino acid metabolism
bbf00550
Peptidoglycan biosynthesis
bbf01100
Metabolic pathways
bbf01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bbf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BBB_0245 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BBB_0245 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BBB_0245 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bbf01011
]
BBB_0245 (ddl)
Enzymes [BR:
bbf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
BBB_0245 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
bbf01011
]
Precursor biosynthesis
Amino acid ligase
BBB_0245 (ddl)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
AFL03841
UniProt:
I3WG28
LinkDB
All DBs
Position
296533..297678
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AA seq
381 aa
AA seq
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MAETAKIRVVVMYGGKADEHSISCISTAGVLRALDTDRFEPVPVGITKQGQWIVDGEDPR
GWDMADGLPVVEKTSGSRDVVLDVALGQDGFFARNDDGTLSSLGHVDAVLPVLHGPYGED
GTIQGLLEMMDVPYVGCGVLASAACMDKHYTKVLLAAAGIPVAPGITVDARGFDAASRFA
ADADGLLAQVEEAGLAYPLFVKPSRAGSSFGVTKVEHAGDAAELAAAVFEASHHDWRILI
EQGIDAREIECAVLCPKAGSEPQASWPGEIVLDKRNSGDDQFYDFDSKYMDSSASHVEVP
ANLPQETLQQVRETAVKAFKAVDGAGLSRVDTFVTPDGEVMVNEINTMPGFTPISMYPKA
WEATGIGYTDLITKLIDGVLR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaacggccaagattcgcgttgtggtgatgtatggcggcaaggccgacgagcat
tcgatttcctgcatttcgactgccggcgtgctgcgcgcgcttgacaccgaccggttcgag
ccggtgccggtgggcatcaccaagcagggccagtggatcgtggacggcgaggacccgcgc
ggatgggatatggccgacggtctgccggtcgtcgagaagacttccggctcgcgcgacgtc
gtgctggacgtggcgctcgggcaggatggcttcttcgcccgcaacgacgacggcacgctg
agctcgctggggcacgttgacgcggtgctgccggttctgcacggcccgtatggcgaggac
ggcacgattcagggtctgctggagatgatggatgtgccgtacgtcggttgcggcgtgctc
gcgtccgccgcgtgcatggacaagcattacacgaaggtgctgctggccgccgccggcatt
ccggtcgctcccggcatcaccgtggacgcgcgcggcttcgacgcggcgtcgcggttcgcc
gctgatgccgatggtctgctcgctcaggtcgaggaggccggactggcgtacccgctgttc
gtcaagccgtcccgcgccggatcgagcttcggcgtgaccaaggtggagcatgccggtgac
gccgccgagctggccgccgccgtgttcgaggcgagccatcatgattggcgaatcctgatc
gagcagggcatcgacgcgcgtgagatcgagtgcgcggtgctgtgcccgaaggccggcagt
gagccgcaggccagctggccgggcgagatcgtgctcgacaagcgcaacagcggcgacgac
cagttctacgacttcgacagcaagtacatggattcgtcggcgagccatgtggaggtgccg
gcgaatctgcctcaggagactctgcagcaggtgcgcgagaccgcggtcaaggcgttcaag
gcggtggatggcgccggcctgagccgcgtggacacgttcgtgacgccggacggcgaggtg
atggtcaatgagatcaacacgatgcccggtttcacgccgatctccatgtatccgaaggca
tgggaggcgaccggcatcggctataccgacctgatcaccaagctgatcgacggcgtgctg
cgctag
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