Bison bison bison (American bison): 104982976
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Entry
104982976 CDS
T08726
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104982976 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbis03041
]
104982976 (EFTUD2)
Spliceosome [BR:
bbis03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
104982976 (EFTUD2)
Complex C
U5 SnRNP specific factors
104982976 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
Motif
Other DBs
NCBI-GeneID:
104982976
NCBI-ProteinID:
XP_010830727
Ensembl:
ENSBBBG00000019307
UniProt:
A0A6P3GVM8
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEVDEDEDDDDVGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHPYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgacgagtttgggaattacatcggaccagagcttgattctgat
gaagatgatgatgaattgggcagagagaccaaagatcttgatgaggtcgatgaggatgag
gacgacgatgatgtgggtgatcacgacgaagaccaccctgggatggaggtggtgctgcac
gaggacaagaagtactaccccaccgccgaggaggtgtacggccccgaggtggagaccata
gttcaggaggaggacacccagcctctcacagaacccattattaagccagtgaaaaccaag
aaattcactctgatggagcagacgttacctgtcacggtgtacgaaatggatttcttggca
gatctgatggataactcggagctcatcagaaatgtgactctctgtggccatctgcaccac
ggcaagacatgttttgtagattgtttaatagagcagactcacccggaaatcagaaagcgc
tatgaccaagatctgtgctacactgacatcctcttcacagaacaagagaggggtgttggc
atcaaaagtactcctgtgacagtggtcttgccagataccaaggggaaatcctacctcttc
aacatcatggacactccaggacacgtgaatttttctgatgaggtcacagcgggcttgcgc
atctcagatggagtggtccttttcatcgatgccgccgagggcgtgatgctgaacacagag
cggctgatcaagcatgcggtgcaggagaggctggcagtcaccgtgtgcatcaacaagatt
gaccggctgatcctggagctgaagctgccacccacggatgcttactataagctgcgtcac
attgtcgatgaggtcaacggcttaataagcatgtactccacggatgagaacctgatcctt
tccccgctcctgggcaatgtctgcttctccagctcccagtacagcatctgcttcacgctg
ggctcctttgccaagatctatgctgacaccttcggtgacattaactaccaggagttcgct
aaaagactctggggtgacatctacttcaaccctaagacgcggaagttcaccaaaaaggcc
ccaaccagcagctcccagaggagttttgtggagtttatcttggagcccctctataagatc
ctcgcccaggtcgtgggtgatgtggacaccagcctcccgaggaccctggatgagcttggc
atccacctgaccaaggaggagctgaagctgaacatccgccccctgctcaggctggtttgc
aaaaaattctttggcgagttcacaggctttgtggacatgtgtgtgcagcatatcccgtct
ccaaaggtgggcgccaagcctaaaatcgagcacccctataccggtggtgtggactctgac
cttggcgaggccatgagtgactgtgaccccgacggtcccctgatgtgccacacgaccaag
atgtacagcacagatgatggggttcagtttcatgcctttggccgagtgctaagtggcacc
atccatgctgggcagcctgtgaaggtactgggggagaactacaccctggaggatgaggaa
gactcccaaatatgcaccgtgggccgcctttggatctccgtggccaggtaccacatcgaa
gtgaaccgtgttcctgctggcaactgggtcctgatcgaaggtgtcgatcaaccaattgtg
aagacagcaaccataaccgaaccccgaggcaacgaggaggctcagatcttccggcccttg
aagttcaacaccacatctgttatcaagattgccgtggagccagtcaatccctctgagctg
cccaagatgctggacggcctgcgcaaggtcaacaagagctacccgtccctcaccaccaag
gtggaagagtctggcgagcatgtgatcctgggcactggagagctctacctggactgcgtg
atgcacgatttgcggaagatgtactcggagatcgacatcaaggtggctgaccctgttgtc
acattctgtgagacggtggtggaaacgtcgtccctcaagtgtttcgccgaaactcccaat
aagaagaacaaaatcaccatgatcgccgagcctctggagaagggccttgcagaggacata
gagaacgaggtggtccagatcacgtggaacaggaagaagctgggagagttctttcagacc
aagtatgactgggatctgctggctgcccgttccatctgggctttcggcccggatgccact
ggccccaacatcctggtggacgataccctgccctcggaggtggacaaggctcttctcggc
tcagtgaaggacagcatcgttcaaggtttccagtggggaaccagggaggggcccctctgt
gatgagttgattcggaatgtcaagtttaagatcctggatgcagtggttgcccaggagccc
ttgcaccggggcgggggccagatcatccccacagcccggagagtcgtctactcagccttc
ctcatggccacccctcgtctgatggagccctactacttcgtcgaggtccaggcccccgca
gattgtgtctctgctgtctacacggtcctggccaggcgcaggggacacgtgactcaggat
gcacccatcccaggctctcctctgtacaccatcaaagctttcattccagccatcgactct
ttcggctttgagactgatctgcgaactcacacgcagggccaggccttttccttgtctgtc
ttccaccactggcagattgtacccggtgaccctctggacaagagcattgtcatccgcccc
ttggagccacagccagctccccacctggcccgagaattcatgatcaaaacccgtcgtaga
aagggcctgagtgaggatgtgagcatcagcaagttcttcgatgatcctatgttgctggag
ctcgccaagcaggatgtggtgctcaactaccccatgtga
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integrated database retrieval system
