KEGG   Babesia bovis: BBOV_IV001520
Entry
BBOV_IV001520     CDS       T01085                                 
Name
(RefSeq) DNA ligase I ATP-dependent (dnl1) family protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
bbo  Babesia bovis
Pathway
bbo03030  DNA replication
bbo03410  Base excision repair
bbo03420  Nucleotide excision repair
bbo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bbo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BBOV_IV001520
   03410 Base excision repair
    BBOV_IV001520
   03420 Nucleotide excision repair
    BBOV_IV001520
   03430 Mismatch repair
    BBOV_IV001520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bbo03032]
    BBOV_IV001520
   03400 DNA repair and recombination proteins [BR:bbo03400]
    BBOV_IV001520
Enzymes [BR:bbo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BBOV_IV001520
    6.5.1.6  DNA ligase (ATP or NAD+)
     BBOV_IV001520
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     BBOV_IV001520
DNA replication proteins [BR:bbo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    BBOV_IV001520
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     BBOV_IV001520
DNA repair and recombination proteins [BR:bbo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     BBOV_IV001520
   NER (nucleotide excision repair)
    Other NER factors
     BBOV_IV001520
   MMR (mismatch excision repair)
    Other MMR factors
     BBOV_IV001520
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-GeneID: 5477536
NCBI-ProteinID: XP_001609317
LinkDB
Position
4
AA seq 800 aa
MKIPGSIDIKSFFQAKPNKDRTNTNRVMGTANNDASLNSNYTLKEECDSHEIGTNTGISK
LTVNRTPKRDILKDSEVNLSWSEDELSVSCSNSNLERDIPSENSLHEVNVPAKKQKTVNI
RRSEADEPSVGSLFNISLKENDKNADIMSAKFDPSLFDISHYKSTFPPQGNRDSLLFNFL
AEILQKVEDAFGSGTGSRKYVFTLLSNFFRVLIYHQPSDVIPAMYLMLNRISAEYEGEEF
GVGDTMLIKAMAQSYGKSEKAVKEMLSKHEDLGKVASLSSCTSQTIVRLPDLTITSVFNN
FKTIAREEGKNSMTRKTDIIKRMLSCAKKIEAKYIVRCLQQKMRIGVNAPTLFQSIADAT
YLTKASKDGQPAIGDIRTSGIEQVDSINDMEKAVKTATTYLPCIETVVGHLLDGDTCDEF
LEHCKIRPGIPVRPMLAKAISKTSDIVQAIGAEDNPFTCEYKYDGERLQIHLLEDRCVKL
FSRNMENLCGKYPDVMENFLTSVKPDVQDCIIDSEVVAYDRSSGKILPFQQLSTRKRKGV
TVNDVTIQVCIYPFDILYLNGEQIVDKSLKERRKALESTVYEKDGLLHFARHKDMDSLED
IDDFLRQAVSDSCEGLMIKSLDSESTYEPQKRSNNWLKFKKDYIDGMGDSVDLVPIAAFL
GKGKRTSVYGSYLLAVYDPIHEVYQSVCKTGTGFSDQTLKDLFDSLQEHTVQNKPSIYVV
SDKFEPDVWFQPAKVWECKAADLSISPIHTASQDMTASGKGIGLRFPRFVRLREDKKPMD
ATTSHQIFDMYESQFKNGAS
NT seq 2403 nt   +upstreamnt  +downstreamnt
atgaagattccaggatcgatagatatcaaaagcttcttccaggccaagcctaataaagat
cgcaccaatacaaatagagtgatgggcactgctaacaacgatgcatcactaaattctaac
tacacattaaaagaagaatgcgattctcacgaaattggaacaaatacaggcatatcaaag
ttaaccgttaatagaactccgaaaagggatattttgaaagattccgaagtgaatttaagt
tggagtgaagatgaactttctgtttcctgttctaacagtaatttggagagggatatacct
tctgaaaactcccttcatgaagttaatgtacctgccaaaaaacaaaagaccgttaatatt
cgccgctcggaagcagatgagccatctgttggttccttgttcaatatctctctgaaggag
aacgacaaaaatgcggacattatgtcagccaaatttgatccgagtttatttgatataagt
cattacaaatcgacatttccgccacaggggaatcgagactcgttacttttcaactttttg
gccgaaatattgcagaaagtggaggatgcatttggttctggtactggtagtaggaaatat
gtttttactttgttatcgaacttcttccgggtgttaatttatcaccaaccaagtgacgtg
attcctgcaatgtatctgatgctaaatagaatttcagcagaatatgaaggggaagaattt
ggagttggtgacactatgctgataaaggccatggcacaatcatacgggaaaagtgaaaag
gcagtcaaagaaatgctgtcgaaacatgaagatctgggaaaagtagcgagcttgagtagc
tgtacatcgcaaacaatcgtcagattgcctgatttgacaataacaagtgtctttaataac
ttcaaaactatagcgagagaagaaggaaaaaattcaatgacacgaaagacggacatcatt
aagcggatgcttagttgtgctaaaaagatagaggcaaagtatattgtgagatgtttacag
caaaaaatgcgtatcggagtcaacgctcccactttgtttcagtcaattgcagatgctaca
tatttaacaaaggcatcaaaggatggacagcccgccattggtgatatacgtacttcggga
atagaacaggttgattctatcaatgatatggaaaaggcagtcaaaaccgccacgacatat
ctcccttgtattgaaactgtagtagggcaccttctggatggtgacacttgtgatgaattt
ttagagcattgtaaaattcgacccggcattccggtgcgtccaatgttggcgaaggctata
agcaaaacttctgacatagtacaagccattggcgctgaggataacccattcacttgtgaa
tataaatacgacggtgaacgtcttcaaatacacttgttggaagatcgttgtgttaagctg
ttcagccgtaatatggaaaacctttgtgggaaatacccggacgttatggaaaattttctt
acaagtgtaaaacctgacgtacaagattgcattatagactctgaagtagtggcatatgat
cgtagtagtggaaagatactcccctttcaacagttatccacgagaaagagaaaaggagtt
actgtcaatgatgtcaccatacaggtatgcatatatccctttgatatattatatctcaac
ggggaacaaattgttgataagtctttgaaagaacgtcgtaaggcactagagagcacggtt
tacgaaaaagacggtctacttcactttgctcgtcacaaagatatggactccctagaagac
attgatgattttctacgacaggctgtatctgactcatgtgaaggattgatgataaagagt
ttggacagtgaatcaacgtatgagcctcaaaaacgctctaacaattggttgaaatttaag
aaggactacatcgatggtatgggcgactctgttgatctcgttccaatagcagcgtttttg
ggaaagggcaaacgtacgagtgtatatggttcatatctactggctgtgtacgatccgata
catgaagtataccagagtgtatgcaaaacgggaactggatttagcgatcaaacgctaaag
gatttgtttgacagcttacaagagcacacagtgcaaaacaaaccatctatatatgttgtt
tcggacaaatttgagcccgatgtgtggtttcagccagcaaaggtttgggaatgcaaagca
gctgacctttcaatttctcctatacacactgcgagccaagatatgaccgccagtggaaag
ggtataggcctccgattccctagatttgtgcgcctgcgagaagacaagaagcccatggat
gctacaacaagccatcaaatatttgacatgtacgaaagccagttcaagaatggagcttcg
tag

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