Bordetella bronchiseptica RB50: BB3462
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Entry
BB3462 CDS
T00141
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
bbr
Bordetella bronchiseptica RB50
Pathway
bbr00540
Lipopolysaccharide biosynthesis
bbr01100
Metabolic pathways
bbr01250
Biosynthesis of nucleotide sugars
Module
bbr_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
bbr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
BB3462 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bbr01005
]
BB3462 (rfaD)
Enzymes [BR:
bbr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
BB3462 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
bbr01005
]
Core region
BB3462 (rfaD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
CAE33954
UniProt:
Q7WGU9
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All DBs
Position
complement(3705728..3706717)
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AA seq
329 aa
AA seq
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MIVVTGAAGFIGSNLVRGLNRRGIQDIIAVDDLTDGDKFRNLVDCSIADYLDKDEFRERV
RGGNLPALRAVLHQGACSDTTERNGRYMLDNNYRVTLELFEYCQAERVPFLYASSAAVYG
GSSVYVEDPANEHPLNVYGYSKLLFDQVLRTRMDSLTAQVVGLRYFNVYGPHEQHKGRMA
SVAFHNMNQFLAEGHVRLFAGWDGYEDGGQSRDFISVEDVVAVNLHFLDNPGQSGVFNCG
TGRAQPFNDVAAAVVNTLRAERGEAALPLAELVKKGLLRYIPFPDDLKGRYQSYTQADVG
RLRAAGFSAPMRDVQTGVSEYVRYWRALK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtggtgaccggcgcggccggctttatcggcagcaacctggtgcgcggcctgaac
cggcgcggcatccaggacatcatcgccgtcgacgacctgaccgacggcgacaaattccgc
aacctcgtcgattgcagcatcgccgactatctcgacaaggacgagttccgcgaacgcgtg
cgcggcggcaacctgccggccttgcgtgccgtgctgcaccagggcgcctgctcggacacc
accgagcgcaacggccgctacatgctggacaacaactaccgcgtcacgctggaactgttc
gagtactgccaggccgagcgcgtgccgttcctgtacgcctcgtcggccgcggtctacggc
ggttcgtcggtctatgtggaagacccggccaacgaacatccgctcaatgtctacggctat
tccaagctgctgttcgaccaggtgctgcgcacgcgcatggacagcctgaccgcccaggtg
gtggggctgcgctatttcaacgtgtacgggccgcacgagcagcacaagggccgcatggct
tcggtggccttccacaacatgaaccagttcctggccgaaggccatgtgcgcctgttcgcc
ggctgggatggctacgaggacggcgggcagagccgcgatttcatttcggtcgaggacgtg
gtggcggtcaatctgcatttcctcgacaaccctggccagtcgggcgttttcaactgtggc
accgggcgcgcccagccgttcaacgacgtggccgcggcggtggtcaataccctgcgcgcc
gaacgtggcgaggcggcgctgccgctggccgaactggtcaagaaaggcctgctgcgctat
atcccgttcccggatgatctgaaagggcgctaccagagctacacccaggccgacgtcggc
cggctgcgggcggccggcttcagcgcgccgatgcgcgatgtacagactggcgtatcggaa
tacgtgcgctattggcgcgccctgaagtag
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