Bradyrhizobium sp. BTAi1: BBta_p0260
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Entry
BBta_p0260 CDS
T00528
Symbol
traR
Name
(GenBank) transcriptional regulator, LuxR family
KO
K19732
LuxR family transcriptional regulator, activator of conjugal transfer of Ti plasmids
Organism
bbt
Bradyrhizobium sp. BTAi1
Pathway
bbt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bbt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BBta_p0260 (traR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbt03000
]
BBta_p0260 (traR)
Transcription factors [BR:
bbt03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
BBta_p0260 (traR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
Sigma70_r4
HTH_10
HTH_23
HTH_38
HTH_28
HTH_24
HTH_Tnp_ISL3
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ABQ39898
RhizoBase:
BBta_p0260
UniProt:
A5EUQ4
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All DBs
Position
pBBta01:191522..192253
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AA seq
243 aa
AA seq
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MKGVKRACDEFVDCLHSAHTEEDFRRVAERTAHALGFRWFAYFGHRANGPKLISSYPKSW
TSHYFREGYDNIDPVLQEPRNTSRMFLWDGREARSAKSPKERRLFDDALSFKIRTGLTVR
IPSSQNQFAAFTLAADDRSLGLDRFIETSQDMLEMVGLTYHAHVSAARIGRTPPDGQQGS
PLTQRERQCLAWISDGKTMQDIAELLGVSPRGVKFHLDNARRNLAALTLPHAVALAFRQG
LLP
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtgtcaaacgagcatgcgatgaatttgtcgattgtcttcactctgcccataca
gaagaggattttcggcgtgtcgcggaacgaaccgcgcatgcattgggtttccgctggttc
gcctattttggccaccgcgccaatggccccaaactgatctcttcctatccgaagagttgg
acaagtcactattttcgcgaaggatacgacaacatcgatcctgttcttcaggagccgcga
aacacaagccggatgttcctgtgggatggacgtgaggcgcgaagcgctaagtcgccgaaa
gaacgccgtctgtttgacgatgcgctcagcttcaagatcaggaccggcctgaccgttcgc
attccctcaagccaaaaccagttcgcggcgttcacgctcgcggcggacgaccgcagcctt
ggactcgatcgtttcatcgagacctcgcaagacatgttggaaatggtgggtctcacctat
catgcgcatgtgagcgccgccagaatcggacgcacgcccccggacggtcagcaggggagc
ccgctgactcagcgcgaacggcagtgtctcgcctggatatctgacggcaagacaatgcag
gatattgcggagcttctcggggtttcgccgcgaggggtgaagtttcatctggataatgcc
aggcgaaatcttgctgcactcacccttccacacgctgtggccctcgcgtttcggcaggga
ttgctcccataa
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