KEGG   Bubalus bubalis (water buffalo): 102395311
Entry
102395311         CDS       T05912                                 
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X5
  KO
K23625  ataxin 2/2L
Organism
bbub  Bubalus bubalis (water buffalo)
Pathway
bbub05014  Amyotrophic lateral sclerosis
bbub05017  Spinocerebellar ataxia
bbub05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    102395311 (ATXN2)
   05017 Spinocerebellar ataxia
    102395311 (ATXN2)
   05022 Pathways of neurodegeneration - multiple diseases
    102395311 (ATXN2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbub03019]
    102395311 (ATXN2)
Messenger RNA biogenesis [BR:bbub03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102395311 (ATXN2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 LSM
Other DBs
NCBI-GeneID: 102395311
NCBI-ProteinID: XP_025122854
EnsemblRapid: ENSBBUG00015014547
LinkDB
Position
17:17398609..17500523
AA seq 1114 aa
MSLKPQQQQQQQQQPQPQPAAANARKPGGGGGGGLLTSPAAAPSSVSSSSAAASSSSSSV
AAASTGGGRPGLGRGRNSSKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIY
EGVFKTYSPKCDLVLDAAHEKSTESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYARR
DAFTDSAISAKVNGEHKEKDLEPWDAGELTTNDELEALENDVSNGWDPNDMFRYNEENYG
VVSTYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEK
YTAVQRNSSEREGHNINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRSTS
HTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPS
RPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFV
SHTPPSEAAAPPTARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTPSGPVLASP
QAGIIPAEAVAMPVPAASPTPASPASNRAVTPSLEAKDSRLQDQRQNSPAGNKENMKPSE
TSSSFSKAENKGISPIVSEHRKQIDDLKKFKNDFRLQPSSTSESMDQLLNKNREGEKSRD
LIKDKIEPNAKDSFIENSSNCTSGSSKPSSPSISPSVLSNTEHKRGPEVTSQGVQTSSPG
CKQEKEDKEEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGH
QQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNMPQQRQD
QHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPV
IQGNARMMAPPTHAQPGLVSSSATQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSL
AQQYAHPNATLHPHPPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASPQQ
QSAIYHAGLAPTPPSMTPASNTQSPQNSFPAAQQTVFTIHPSHVQPAYTNPPHMAHVPQY
KPTTNSSCKAALEEPKGQIPSSLLLLLPTGSTEN
NT seq 3345 nt   +upstreamnt  +downstreamnt
atgtcgctgaagcctcagcagcaacagcagcagcagcagcagccgcagccgcagcccgcg
gccgccaatgcccgcaagcctggcggcggcggcggcggcggccttctcacgtcgccagcc
gccgcgccgtcctcagtctcgtcgtcctcggccgcggcttcctcctcctcctcctcagtg
gcggcggctagcacaggcggcgggcggccgggcctgggcagaggccgaaacagtagcaaa
ggactgcctcaatccacgatttcttttgatggaatctatgcaaatatgaggatggttcat
attcttacatcagttgttggatccaaatgtgaagtacaagtgaaaaacggaggtatatat
gaaggagtttttaaaacatacagtcctaagtgtgatctggtacttgatgctgcacatgag
aaaagtacagaatccagttcggggccaaaacgtgaagaaataatggagagtattttgttc
aagtgttcagactttgttgtggtgcagtttaaagatatggactccagttatgcaagaaga
gatgcttttactgactctgctatcagtgctaaagtgaatggtgaacacaaagaaaaggac
ctggagccttgggatgcaggtgaactcactaccaatgacgaactggaggctttggaaaat
gatgtttctaatggatgggatcccaacgatatgtttcgatataatgaagaaaattatggt
gtagtgtctacatacgatagcagtctgtcttcatatacggtgcccttagaaagggataac
tcagaagaatttttaaaacgagaagcaagggcaaaccagttagcagaagaaattgaatca
agtgcccagtataaagcccgggtggccctggaaaatgatgataggagtgaagaagaaaaa
tacacagcagttcagagaaattccagtgaacgtgagggccacaacataaacactagggaa
aataaatatattcctcctggacaaagaaatagagaagtcatatcctggggaagtgggcgt
cagaattcaccacgtatgggccagcctggatcgggctccatgccatcaagatccacctct
cacacttcagatttcaacccgaattctggttcagaccaaagagtagttaatggaggtgtt
ccctggccatcgccttgcccatctccttcctctcgcccaccttctcgctaccagtcaggt
cccaactctcttccacctcgggcagccacccctacacggccgccctccaggcccccctcg
cggccatccagacccccgtctcacccctctgctcatggttctccagctcctgtctctact
atgcctaaacgcatgtcttcagaagggcctccaaggatgtccccaaaggcccagcgacac
cctcgaaatcacagagtttctgctggaaggggttccatttccagtggcctagaatttgta
tcccataccccaccaagtgaagcagctgctcctccaacagcaaggaccagtcctgcaggg
ggcacatggtcatccgtggtcagcggagttccaagattatcccctaaaacacacagaccc
aggtctcccagacagaatagtattggaaatactcctagtgggccagttcttgcttctccc
caagctggtattatcccagctgaagctgttgctatgcctgtaccagctgcatctcctaca
cctgccagtcctgcatccaacagagctgttaccccatctcttgaggctaaagattccagg
cttcaagatcagaggcaaaactctcctgcagggaataaagaaaatatgaagcccagtgag
acatcatccagcttctcaaaagctgaaaataaaggtatatcaccaattgtttctgaacat
agaaaacagattgatgatttaaagaaatttaagaatgattttaggttacagccaagttct
acttctgaatctatggatcagctgctaaacaaaaatagagagggagaaaaatcaagagat
ttgatcaaagacaaaattgaaccaaatgctaaggattctttcattgaaaatagcagcaac
tgcaccagtggcagcagcaagccgagcagccccagcatttccccttcagtcctcagtaac
acggagcacaagaggggacctgaggtcacatcccaaggggttcagacttccagtccagga
tgtaaacaagagaaagaagataaagaggagaagaaagacgcagctgagcaagtgaggaaa
tcaacgttgaatcccaatgcaaaggagttcaaccctcgttctttttctcagccaaagcct
tctaccaccccaacttcgcctcgtcctcaagcacaacctagcccatctatggtgggtcat
cagcagccaactccagtttatactcagcctgtttgttttgcaccaaatatgatgtatccg
gtccctgtgagcccgggcgtgcaacctctgtatcctatacctatgacgcccatgccagtc
aatcaagccaagacatatagagcaggtaaagtaccaaatatgccgcaacaacggcaagac
caacaccatcagagtaccatgatgcacccagcctcagcagcaggcccaccaattgtggcc
accccaccagcttattccacacagtatgtcgcctacagtcctcagcagtttccaaatcag
cctcttgttcagcatgtgccacattatcagtctcagcatcctcatgtctatagtcctgta
atacagggtaatgctagaatgatggcaccaccaacacatgcccagcctggtttagtgtcc
tcttcagcgactcagtacggggctcatgagcagacacatgcgatgtatgcatgtcccaaa
ttaccatacaacaaggagacaagcccttctttctactttgccatttccactggctccctt
gctcagcagtatgcgcaccctaatgctaccctgcacccacatcctccacatcctcagcct
tcagctacgcccaccggacagcagcaaagccaacatggtgggagccatcctgcacccagt
cctgttcagcaccatcagcaccaggccgctcaggctctccatctggccagtccacagcag
cagtctgccatttaccatgcggggcttgcgccaaccccaccttccatgacacctgcctcc
aatacacagtctccacagaatagtttcccagcagcacagcagaccgtctttaccattcat
ccttctcatgttcagccggcttacaccaatccaccccacatggcccatgtacctcagtac
aagcccaccaccaacagcagttgtaaggctgccctggaggaaccgaaaggccaaattccc
tcctcccttctactgcttctaccaactggaagcacagaaaactag

DBGET integrated database retrieval system