Bubalus bubalis (water buffalo): 102395332 Help Entry 102395332         CDS       T05912                                  Symbol RC3H1 Name (RefSeq) roquin-1 isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism bbub  Bubalus bubalis (water buffalo) Brite KEGG Orthology (KO) [BR:bbub00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:bbub03000]     102395332 (RC3H1)    04121 Ubiquitin system [BR:bbub04121]     102395332 (RC3H1) Transcription factors [BR:bbub03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     102395332 (RC3H1) Ubiquitin system [BR:bbub04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     102395332 (RC3H1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 Prok-RING_4 zf-CCCH zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 FYVE zf_CCCH_4 zf-CCCH_4 Vesi_VP2 PaaA_PaaC Baculo_IE-1 zf-RING_4 zf-RING_6 zf-RING_10 Motif Other DBs NCBI-GeneID:  102395332 NCBI-ProteinID:  XP_025141392 EnsemblRapid:  ENSBBUG00015019402 LinkDB All DBs Position 5:25673915..25749762 Genome browser AA seq 1133 aa AA seqDB search MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD IELLPVNSALLQLVGAQVSEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSTAILPEE GAVDLPSRKTPALPNGIVSAGNAVTQLIPRGTDPSYESSLKPGKIDHLSSSAPGSPPDLL ESVPKSISTLPVNPHPVPPRGPTELPPMPVTKPLQMVARGSQLYPAQQADVYYQDPRGAA PPFESAPYQQGMYYAPPPQCVSRFVRPPPSAPEPGAPYLDHYPPYLQDRVVNSQYGTQPQ QYPPMYPPHYDGRRVYPAQSYAREEIFRESPIPIEIPPAAVPPYVPEPRERYQQMEGYYP VAPHPTQIRPSYNREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSP TLPSAFHQEEFLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEM MNVESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQAMA PQGAPTKSINISDYGPYGTHGGWGGSPYSPHQNIPSQGHFSERERISMSEVASHGKPLPS AEREQLRLELQQLNHQISQQTQLRGLEAVSNRLVLQREANTLAGQSQPPPPPPPKWPGMI SSEQLSLELHQVEREIGKRTRELSMENQCSLDMKSKLNTSKQAENGQPEPQNKVPAEDLT LTFSDVPNGSALTQENISLLSNKTSCLNLSEDPEGGGDNNDSQRSGVTSSSTP NT seq 3402 nt NT seq  +upstreamnt  +downstreamnt atgcctgtacaagctccacagtggacggatttcctctcctgcccaatttgcactcagact tttgacgaaacaattagaaagcccatcagtttgggttgtggccatactgtctgcaagatg tgcctgaacaaactccaccgcaaggcttgcccatttgaccagaccactatcaatacagac attgaactcctcccagtgaactcagcattgttgcagctagtgggtgctcaggtttctgag cagcagcccattactttgtgtagtggggttgaagatacaaaacattatgaggaagccaaa aaatgcgtagaagaattagcactgtacctgaaaccactcagcagtgctagaggagtgggt ctgaatagtactactcagagtgttctgagtcgcccaatgcagaggaagctagtgacgctg gtccactgccaactagtggaagaagaaggcaggattcgtgccatgagggcagctcgatct ttaggtgaacggacagttacagagctcattctccaacaccagaatcctcagcaactctct tccaatctttgggcagcagtcagagctagaggctgccagttccttggaccagcaatgcag gaggaagccctaaagctggttctcctggccttagaagatggttctgctttgtctagaaaa gtattggttctctttgtggtgcaaagattggagccacggtttcctcaagcctctaaaact agcattgggcatgttgtccagctcctttatagagcctcctgcttcaaggtcaccaaacgt gatgaagactcttctttgatgcagctgaaagaagaatttagaacctatgaagctctgcgg cgagaacatgactcccagatagtgcagattgctatggaagcaggcttacgaattgcacca gaccagtggtcctctttgctgtatggggaccagtctcacaaatctcatatgcagtccatt attgacaagttgcagaccccagcctcttttgcacaaagtgttcaggaactaacaattgct ctccagcggactggagatccagcaaacttgaatcgactaagaccccatttggagctatta gcaaacattgaccctagtccagatgctcctcctcctacttgggaacagctagaaaatggg ttggttgctgtgcgtacagtggtacatgggctggttgattatatccagaatcacagcaaa aaaggaacagatcaacagcagcctccacagcatagcaaatataaaacatacatgtgtcga gacatgaagcagagaggaggatgccctcggggggccagctgtacatttgcacactcacag gaggaactggaaaaatttcgtaaaatgaacaaacgcctggttcctagaagacccctgagt gcctctttgggtcaacttaatgaggtgggcctgccttcaacagctatccttccggaagaa ggggcagtggatctgcctagcagaaaaacccctgctctgccgaatgggattgtatcagca gggaatgcagtaacacaactgattccacgagggacagaccccagctacgaatccagtctg aaaccaggaaagatcgatcacttgagcagtagtgcccctgggtcccctcctgacctgcta gaatcagtccctaagagtatttctaccttgcctgttaatccgcatcctgtacctccaaga ggaccaacagagctgccccctatgcctgtcactaaacctcttcagatggtggcgcgaggt tctcagctctatccagcacagcaggctgatgtttattaccaggatcctcgaggagccgct ccgccgttcgaatcagcaccttatcagcagggtatgtactatgctccacctccacaatgt gtgtctcgttttgtccgacctccaccatctgctcctgaacctggtgctccctacttggat cattatccgccatacctccaagatcgtgtagtaaactcacagtatggcacacagccacaa cagtaccctcctatgtacccaccacactatgatggccgtcgagtatacccagctcagtct tacgcaagagaggagattttccgagaaagtcctatacccattgagattccacctgcagca gtgccaccctatgtaccagaacccagagaaagataccaacaaatggaaggttactatcca gtggctccacacccaactcagatcagaccttcatacaacagagagcctccatacagtcgg cttccgcctcctccccagccccatcctagtctagatgagctacatcgaagacgaaaggaa ataatggcacagctagaagaaaggaaggttatctctccacctccttttgcaccttcacca acattgccttctgccttccatcaagaggaatttttggatgaagacttgaaggtagctggg aaatacaaaggaaatgattatagccagtattcaccctggtcatgtgacactattggctcc tacattggaaccaaagatgcaaaacctaaagatgttgtggcagcagggagtgtggaaatg atgaatgtggagagtaaaggaatgagagaccagcgattggaccttcagagaagagcagca gaaaccagtgatgatgatctcatcccatttggagaccgaccaacagtatctcggtttggt gccatttctcgaacttccaaaacgatatatcagggtgctggcccaatgcaggctatggca cctcagggagctcccacaaaatctattaacatttcagattatggtccatatggaacccat ggtggctggggaggttctccatattcacctcatcaaaacataccttctcagggacacttc agtgagagggagagaatatctatgtcagaagtggctagtcatggaaaaccccttccatct gctgagagggaacagctacgactagaattacagcagctaaaccatcaaattagccaacag acccagctacgtggactagaggctgttagtaacagactggtgttgcagagggaggcgaat accttggcaggccagtcacagcccccaccaccaccacctccaaaatggcctggaatgatt tcaagtgagcagttgagtttggaactgcaccaggtggaaagggaaattgggaagagaacc cgggaactgagtatggagaaccagtgttctctggacatgaaaagcaaattgaatacaagt aagcaagcagaaaatggacaaccagaaccacaaaataaggttccagctgaggaccttacg ttaacattcagtgacgtgcctaatggatcagcattgacacaagagaatatcagcctcctg tccaacaagaccagctgtctgaacctgtcagaggaccctgagggaggaggggacaataat gactcccagagatcaggagttacatccagttctactccataa

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