Bubalus bubalis (water buffalo): 102396562
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Entry
102396562 CDS
T05912
Symbol
KDM1A
Name
(RefSeq) lysine-specific histone demethylase 1A isoform X2
KO
K11450
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:
1.14.99.66
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04714
Thermogenesis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
102396562 (KDM1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbub03036
]
102396562 (KDM1A)
Enzymes [BR:
bbub01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.66 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
102396562 (KDM1A)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
102396562 (KDM1A)
REST complex
102396562 (KDM1A)
Histone demethylases
102396562 (KDM1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox
FAD_binding_2
FAD_oxidored
HI0933_like
FAD_binding_3
Thi4
GIDA
2-Hacid_dh_C
Pyr_redox_3
MutS_IV
Sec10_N
Lycopene_cycl
Motif
Other DBs
NCBI-GeneID:
102396562
NCBI-ProteinID:
XP_025134540
EnsemblRapid:
ENSBBUG00015001022
LinkDB
All DBs
Position
2:complement(181809757..181875846)
Genome browser
AA seq
855 aa
AA seq
DB search
MLSGKKAAAAAAAAAAAAAAAAGSEAGAGVAGGAENGSEVAAPPAGLSGPGEAGPGAAGE
RTPRKKEPPRASPPGGLAEPPGSAGPQAGPTAVPGSATPMETGIAETPEGRRTSRRKRAK
VEYREMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPEEENESEPEEPSGVEGA
AFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLFIRNRTLQLWLDNPKIQLTFEATLQQ
LEAPYNSDTVLVHRVHSYLERHGLINFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQL
QSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIK
QKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQ
LQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAE
FLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLE
FANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTA
SGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFG
NLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMEN
ISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMA
QPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLP
RQATPGVPAQQSPSM
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctgggaagaaggcagcggctgcagcggcggcggcggcggcggcggcggcggcg
gctgccgggtcggaggccggtgcgggggtagcgggtggcgcggagaacggctctgaggtg
gccgcaccgcccgcgggcctgtccggccccggcgaggcggggccgggggcggctggggag
cgcactccccgcaagaaggagcccccgcgggcctcgccccccggcggcctggccgagccg
ccggggtccgccgggcctcaagccgggcctaccgccgtccctgggtctgcgacccccatg
gaaacgggaatcgcagagacgccggaggggcgacggaccagccggcgcaagcgggcgaag
gtagagtatagagagatggatgaaagtttggccaacctctcagaagatgagtattattca
gaagaagagagaaatgctaaagcggagaaggaaaagaagcttcctccaccaccccctcaa
gccccacctgaggaagaaaatgaaagtgagcctgaggaaccatctggtgtggagggtgca
gctttccagagtagacttcctcatgaccgaatgacttctcaagaagcagcctgttttccg
gatatcatcagtggaccacagcagacccagaaggtttttctgttcattagaaatcgcaca
ttgcagttgtggttggataatccaaagattcagctgacattcgaggccactctccagcaa
ttagaagcgccttacaacagtgatactgtgcttgtccaccgagttcacagttatttagag
cgtcatggtcttatcaacttcggcatctataagaggataaagcccctcccaactaagaag
acaggaaaggtaatcatcataggctctggggtctcaggcttggcagcagctcgtcagtta
cagagttttggaatggatgtcacacttctggaagccagggatcgtgtgggtggacgagtt
gctacatttcgcaaaggaaactatgtagctgaccttggagccatggtggtaacaggtctt
ggagggaatcccatggctgtggtcagcaaacaagtaaatatggaactggccaagatcaag
caaaaatgcccactttatgaagcgaatggacaagctgttcctaaagagaaagatgaaatg
gtagagcaagagtttaaccggttgctagaagctacgtcttatcttagtcatcaactggac
ttcaacgtcctcaataataagcctgtgtcccttggccaggcattggaagttgtcattcag
ttacaagaaaagcatgtcaaagatgaacagattgaacattggaagaagatagtgaaaact
caggaggaactgaaggaacttcttaataagatggtaaatttaaaagagaaaattaaagaa
ctccatcagcaatacaaagaagcatctgaagtcaaaccacccagagatatcactgctgag
ttcttagtgaaaagcaaacacagggatctaactgccctgtgtaaggaatatgatgaatta
gctgagacacaaggaaaactagaagaaaaacttcaagagttggaagccaatcccccaagt
gatgtatatctctcatcaagagacagacagatacttgattggcattttgcaaatctggag
tttgctaacgccacgcctctctccacactctccctcaagcactgggatcaggatgatgac
tttgagtttactggcagccacctgacggtgaggaatggctactcgtgtgtgcctgtggct
ttagcagaaggtctggacattaaactgaatactgcggttcggcaggttcgctacacagcc
tcagggtgcgaagtgatagctgtgaatacccgctccacaagccagaccttcatttataag
tgtgacgcggtcctctgtacccttcccttgggcgtcttgaagcagcagccaccagctgtt
cagtttgtgccgcctcttcctgagtggaaaacatctgcagtccaaaggatgggatttggc
aacctcaacaaggtcgtgttgtgctttgaccgggtgttctgggacccaagtgtcaatttg
tttggccatgttggcagcacaactgcaagcagaggtgaactcttcctcttctggaacctc
tataaagctccaatactgttggcactcgtggcaggagaagctgctggcatcatggaaaac
ataagtgatgatgtgattgttggccgatgcctggccatcctcaaggggatttttggcagc
agcgcggtgccccagcccaaggaaactgtggtatctcgctggcgtgctgatccctgggcc
cgaggctcctattcttacgtagccgcaggatcatctggaaatgactatgacttaatggct
cagccaatcactcctggcccctcaattccaggtgccccacagcctattccacgactcttc
tttgctggagaacatacaatccgtaactacccagccacagtccatggtgctctgctgagt
gggctgcgagaagcaggaagaattgcagaccagttcttgggggccatgtacacactgcct
cgccaggccacacccggcgtccctgcacagcagtccccgagcatgtga
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