Bubalus bubalis (water buffalo): 102407214
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Entry
102407214 CDS
T05912
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X2
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04120
Ubiquitin mediated proteolysis
bbub04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102407214 (SYVN1)
04120 Ubiquitin mediated proteolysis
102407214 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbub04121
]
102407214 (SYVN1)
Enzymes [BR:
bbub01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102407214 (SYVN1)
Ubiquitin system [BR:
bbub04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102407214 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
102407214
NCBI-ProteinID:
XP_044799630
EnsemblRapid:
ENSBBUG00015020727
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All DBs
Position
5:complement(124826563..124833761)
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AA seq
601 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSPPPPEPADQGPPPAPHAP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPGSGEAAAPPSTSAAALSRPNGA
ATTTAAAAASASAPGPASSPEASPAPGFPFPPPWMGMPLPPPFGFAGLTPEELRALEGHE
RQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATAAQPTEETAPSAVAATSS
TSIPSSEATTPSPGASPPAPEPEKPSAPESAGTEELPEDGEPDAAELRRRRLQKLESPVA
H
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgttccgaactgccgtgatgatggcggccagcctggcgctgaccggggccgtggtggct
catgcctactacctcaagcaccagttctaccccacggtggtgtacctgaccaagtccagc
cccagcatggcagtcctgtatatccaggcctttgtccttgtcttcctcttgggcaaggtg
atgggcaaggtgtttttcggacagctgagggcagcagagatggagcaccttctggaacgt
tcctggtatgctgtcactgagacttgtctggccttcaccgtctttcgggacgacttcagc
ccccgctttgttgctctctttactctcctcctcttcctcaagtgttttcactggctggct
gaggaccgtgtggactttatggaacgcagccccaatatctcctggctctttcactgccgc
attgtctcccttatgttcctcctgggtatcctggacttcctcttcgtcagccatgcctat
cacagcatcctgacccgaggggcctctgtgcagctggtgtttggctttgagtacgccatc
ctgatgaccatggtgctcaccatcttcatcaagtatgtgctacactccgtggacctccag
agcgaaaatccctgggacaacaaggctgtgtacatgctctacaccgagctgttcacaggc
ttcatcaaggtcctgctgtacatggctttcatgaccatcatgatcaaggtgcatacgttc
cctctcttcgccatccggccgatgtacctggccatgaggcagttcaagaaagctgtgact
gacgccatcatgtctcgccgagctatccgcaacatgaacacactgtatccagacgccact
ccagaggaactgcaggcgatggacaatgtctgcattatctgccgagaagagatggtgact
ggtgccaagagactgccctgcaaccacattttccataccagctgcctgcgctcctggttc
cagcggcagcagacctgccccacctgccgtatggacgtccttcgggcatcgctgccgacc
cagtcaccgccgccccctgagcctgcagatcaggggccaccacctgccccccacgcccca
ccactcctgccccagccccccaacttcccccagggcctcctgcctcccttccctccaggc
atgttcccgctgtggccccccatgggccccttcccgcctgtcccacctcccccgggctca
ggagaggctgcggcccctccgtccaccagtgcagctgccctttctcggcccaatggagca
gccacaaccacagccgctgctgccgcctctgcctcagcacctggtcctgcctcctccccg
gaggccagccctgcccccggcttccccttcccccctccctggatgggcatgccgctgcct
ccgccctttggctttgctgggctgaccccagaggagctgcgggctctggaaggccatgag
cgacagcacctggaggcccggctacagagcctgcgcaacatccacacgctgctggacgcc
gccatgctacagatcaaccagtacctcaccgtgctcgcctccctggggcccccccggccc
gccaccgcagctcagcccactgaggagactgcccctagcgctgtcgctgccacctcttcc
accagcatccccagctctgaggccaccaccccatccccaggagcctccccaccagcccct
gaacccgagaagccttcagctcctgagtcagcgggcactgaggagctgcctgaagatggg
gagcctgatgcagcggagctgcgccgccgccgcctacaaaagctggagtcccctgttgcc
cactga
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