Bubalus bubalis (water buffalo): 102408652
Help
Entry
102408652 CDS
T05912
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X2
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub00310
Lysine degradation
bbub01100
Metabolic pathways
bbub04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102408652 (SETDB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
102408652 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbub03036
]
102408652 (SETDB1)
Enzymes [BR:
bbub01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
102408652 (SETDB1)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102408652 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
102408652 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
MBD
SET
Pre-SET
DUF4537
Chromo
Motif
Other DBs
NCBI-GeneID:
102408652
NCBI-ProteinID:
XP_025143677
EnsemblRapid:
ENSBBUG00015002543
LinkDB
All DBs
Position
6:complement(19898877..19932074)
Genome browser
AA seq
1289 aa
AA seq
DB search
MSSLPGCVGLAAATAAVESEEIAELQQSVVEELGISMEELRQFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGNRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMPGELSKDGDLVVSMRILGKKRTKTWHKGTLIAIQTVGSGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPMEPPQPTAPPAPPAPPGPALSPQAGDSDLEGQ
LAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENAPGGKPGINQTYRSPLGSSTSAPAP
SAPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRSEQYRGKNPLLV
PLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFCLDP
YVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTG
PEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTGVYECN
KRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFA
DKEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTEDPEESN
DDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSEMSSKDSRPPDLGPPHIPVPPS
IPVGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKTSEGVEGRTGGGRGEAE
KASTSGLGFKDEGDIKQAKKEDPDDRNRMSIVTESSRNYGYNPSPVKPEGLRRPPSKTSM
HQSRRLMASAQPNPDDVLTLSSSTESEGESGTSRKPTAGQTSAAAMDSDDIQTISSGSEG
DDFEDKKNMSGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGESAPIRKNTRQFYD
GEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELT
WDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccctccctgggtgcgttggtttggcagctgcaacagcagcagtggagtctgaa
gaaattgcagagctgcaacagtccgtggttgaggagctgggcatctcaatggaggagctt
cgacagttcattgatgaagaactggaaaagatggactgtgtacagcagcgcaagaagcaa
ctagcagagttggagacttgggtaatacaaaaggaatctgaggtggcccatgttgaccaa
ctctttgatgatgcatccagggcagtgactaactgtgagtctttggtgaaggacttttat
tccaaactgggactacagtaccgggacagcagctctgaagatgaagcttcccggcctaca
gaaataattgagattcctgatgaagacgatgatgtcctcagtattgattcaggtgatgct
gggaacagaactccaaaagaccagaagctccgtgaagctatggctgccttaagaaaatcg
gctcaagatgtgcagaagttcatggatgctgtcaacaagaagagtagttcccaggatcta
cacaaaggaaccttgagtcagatgcctggagaattgagcaaagatggtgacttggtcgtc
agcatgcgcatcctcggcaaaaaaagaactaagacgtggcacaaaggcacccttattgcc
atccagacagttgggtcaggaaagaagtacaaggtgaaatttgacaacaaaggaaagagt
cttctgtcaggaaaccacattgcctacgattaccaccctcctgctgacaagttgtatgtg
ggcagtcgagtagtggccaaatacaaagatgggaatcaggtctggctctatgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcattttctttgatgatggc
tatgcttcctatgtgacacagtctgaactgtatcccatttgccggccactgaaaaagact
tgggaggacatagaagacatctcctgccgagacttcatagaagagtatatcaccgcttac
cccaaccgccccatggtgttgctcaagagtggccagctgatcaaaaccgagtgggaaggc
acgtggtggaagtcccgagtcgaggaggtggacggcagccttgtcaggatcctctttctg
gatgacaaaagatgtgaatggatctatcgaggctctacacgactggagcccatgttcagc
atgaagacatcatccgcctctgcactagagaagaagcaagggggacagctcagaacacgt
ccaaatatgggtgctgtgagaagcaaaggtcctgtggtccagtacactcaggatctaaca
agtactggaacccagttcaagcctatggaacccccacagccaacagccccacctgcccca
cctgccccacctggtccagctctgtccccccaggcaggtgacagtgacttggaaggccag
cttgcccaatctcggaagcaggtagccaaaaaaagcacatctttccggccaggatctgtg
ggctctggtcattcctcccctacatcccctgcactcagtgaaaatgcccctggtgggaaa
cctgggatcaatcagacatataggtcacctttaggctcttcaacctctgccccagcaccc
tcagctcccccagcacccccagccttccatggcatgctggaacgggcccctgcagagccc
tcctaccgtgcccccatggagaagcttttctacttacctcatgtttgcagctatacttgt
ctgtctcgagtcagacctatgagaagtgagcagtatcggggcaagaaccctctgttagtc
ccactactctatgacttccggcgaatgacagcccggcgccgagtaaaccgcaagatgggc
tttcatgttatctataagacaccctgtggtctctgccttcggacaatgcaggagattgag
cgttacctttttgagactggctgtgacttcctcttcctggagatgttctgtttggatccg
tatgttcttgtggaccgaaagtttcagccctataagcctttttactatattttggacatt
acctatgggaaggaagacgttcctctatcctgcgttaacgagattgacacaactccccca
cctcaggtggcctacagcaaggagcggatcccgggcaagggtgttttcattaacacaggc
cctgaatttcttgtcggctgtgactgcaaagatgggtgccgggacaagtccaagtgtgcc
tgccatcagctaactatccaggctacagcctgcaccccaggaggccaaatcaaccccaac
tctggctaccaatacaagagactagaagaatgtctgcccacaggagtttatgagtgtaac
aaacgctgcaagtgtgaccctaacatgtgcacaaaccggttggtacagcatggcctgcag
gttcgtctgcagctcttcaagacccagaacaagggctggggtatccgttgcttggatgac
attgccaaaggctcctttgtctgtatttatgcagggaagatcctgacagatgactttgct
gacaaggagggcctggaaatgggtgatgagtactttgccaatctggaccatattgagagc
gtggagaacttcaaggaggggtatgagagtgatgccccctgttcctctgacagcagtggt
gtagacttgaaggaccaggaggatggcaacagcggcacagaggaccccgaggagtccaat
gacgacagctcagatgacaacttctgtaaggacgaggacttcagcaccagctcggtgtgg
cgcagctatgctacccgacggcagacccggggccagaaggagaatggattgtctgagatg
tcttccaaggactctcgccccccagacctagggcccccacatattcctgtccctccatca
atccctgtaggtggctgcaatccaccttcctctgaagagacacctaagaacaaagtggcc
tcatggttgagctgcaacagtgtcagtgaaggtggctttgctgactctgatagccgttca
tctttcaagactagtgaaggtgtggaaggccgcactgggggaggcagaggggaagctgag
aaggcttccacctcagggctgggcttcaaggatgagggagacatcaagcaggccaagaaa
gaggaccctgatgaccgaaacaggatgtcgatagttactgaaagctctcgaaattatggt
tacaatccttctcctgtgaagcctgaaggacttcgccgcccaccaagtaagactagtatg
catcagagccgacgactcatggcctctgctcagccaaacccggatgatgtcctgaccctg
tccagcagcacagaaagtgagggggaaagtgggaccagccggaagcccactgctggccag
acttcagctgcagccatggacagtgatgatatccagaccatctcctctggctctgaaggg
gatgactttgaggacaagaagaacatgtctggtccaatgaagcgccaagtggcagtaaaa
tccacccggggttttgctttgaaatcaacccatggcattgccattaaatcaaccaacatg
gcatctgtggaaaagggggagagtgcacccattcgtaagaatacacgtcagttctacgat
ggggaggagtcttgctacatcatcgatgccaagcttgaaggcaacctgggccgctacctc
aatcacagttgcagccctaacctgtttgtccagaatgtcttcgtggatactcatgatctc
cgcttcccatgggtggccttcttcgccagcaagagaatccgggctggcaccgagcttacc
tgggactacaactatgaggtgggcagcgtggaaggcaaggagctgctttgctgctgcggg
gccatcgaatgccgagggcgtcttctttag
DBGET
integrated database retrieval system
