Bacillus bombysepticus: CY96_22080
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Entry
CY96_22080 CDS
T03597
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bby
Bacillus bombysepticus
Pathway
bby03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CY96_22080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bby03400
]
CY96_22080
Enzymes [BR:
bby01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CY96_22080
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CY96_22080
DNA repair and recombination proteins [BR:
bby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CY96_22080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AHX20588
UniProt:
A0A9W3LGW9
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All DBs
Position
complement(4286800..4287630)
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AA seq
276 aa
AA seq
DB search
MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGEKIENIKRRGK
FLLLYVTNYVIVSHLRMEGKFLLHQEDEPIDKHTHVRFLFTDGTELHYKDVRKFGTMHLF
KKGEEMNQMPLADLGPEPFDAELTTQYLQERLQKTNRKIKVVLLDQRLLVGLGNIYVDEV
LFRSQIHPEREASSLTVEEIERIYEATVTTLSEAVKRGGSTIRTYINSQGQIGSFQELLN
VYGKKGEPCVTCGTILEKTVVGGRGTHYCPICQPRI
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaggttgaaaatgtcagacggacacttgaaaatcttgtaacagga
aaaacgattgaagatgttattgttacttatccaaaaatagtgaaacgaccggatgatgca
gaaatttttaaagaaatgctaaaaggcgagaagattgaaaatataaagcgaagaggtaag
tttttgcttctatatgtaacaaattatgttattgtttcacatttgcgtatggaaggtaag
tttttactacatcaagaggatgagccgattgataaacatacgcatgtccgtttcttattt
acagatggaacggaattacattataaagatgtgagaaaatttggtacgatgcatctcttt
aagaaaggtgaagaaatgaaccaaatgcctcttgctgacttaggtccggagccatttgat
gcggaattgacaacgcagtatttacaagaaagattgcaaaagacgaatcgtaaaataaaa
gttgtgctattggaccagcgtcttttagtagggcttggaaatatatatgtagatgaagtt
ttattccgttctcaaattcatcctgaacgagaagcgtcgtctttaacagtagaagaaatt
gagcgaatttatgaggctaccgttacaacgctaagcgaagcggtgaagcgtggcggaagt
acaattcgaacgtatatcaactcacaagggcaaattggttcgttccaagaactcctaaat
gtatacggaaaaaagggagaaccatgtgtaacttgcggtacgatattagaaaaaacagtt
gttggcggacgaggaacgcattactgcccaatttgtcagcctagaatatag
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