Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043: BBCT_0005
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Entry
BBCT_0005 CDS
T03931
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bcat
Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043
Brite
KEGG Orthology (KO) [BR:
bcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcat03032
]
BBCT_0005
03400 DNA repair and recombination proteins [BR:
bcat03400
]
BBCT_0005
Enzymes [BR:
bcat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BBCT_0005
DNA replication proteins [BR:
bcat03032
]
Prokaryotic type
DNA Topoisomerases
BBCT_0005
DNA repair and recombination proteins [BR:
bcat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BBCT_0005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
BAR00973
LinkDB
All DBs
Position
5303..7402
Genome browser
AA seq
699 aa
AA seq
DB search
MADLDADSLNESAENTQEDQIQNDQLEDAQLDDTLAPEHYDASDLRVLEGLEAVRIRPGM
YIGSTGPRGLHHLVYEIVDNSVDEALAGYASHIEVTILPDGGVRVVDDGRGIPVDEVPGE
GVSGVETVMTKLHAGGKFGGGGYAVSGGLHGVGISVVNALSTRVDIEVRRQGFHWTQTYI
NQKPTSRLLKGEPMGEDESTGTSVTFWADGAIFETTTYDFEILRNRFQQMAFLNKGLKLS
LTDLREPDQAGDEVAGDGDDNAEPKHQTVTYQYNDGIKDYVDYLVKSRKATPIEPDVIDF
EAEDLKIGISAEIAMQWTTAYSEAVHTFANTISTTEGGTHEEGFRAALTSLVNRYAREKN
ILKDKDENLSGDDVREGLTAVVSVKLTTPQFEGQTKTKLGNSEAKTFVQRVMTDKLGDWF
DSHPSEAKNIIQKAIEASRARLAAKKARENTRRKSIFESAGMPDKLKDCQSNNPEECELF
IVEGDSAGGSAIQGRNPITQAILPLRGKILNTERASLDRMMKSETIESLITAVGGGYGED
FDLNKVRYHKVIIMADADVDGAHIATLNLTLFFRYMRPMITAGYVYVAMPPLYRLKWTKG
AHDFVYTDAERDRVLAEGKAAGRQLPKGEGIQRYKGLGEMSYQELWETTMDPDHRILKQV
QIEDAAAADETFSMLMGDEVEPRRLFIQRNARNVSWIDA
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaccttgatgcggattcgctgaacgaatcagctgaaaacacgcaggaagatcag
atccaaaacgatcagctcgaagatgcgcagctcgatgacaccttggctccggagcattac
gacgcgtccgatctgagagtgttggaaggcctcgaagcggtgcgaatccgcccaggcatg
tacatcggctccaccggcccccgtggcctgcaccatctggtgtatgagatcgtcgacaac
tccgtcgacgaagcgctggcgggctatgcctcgcatatcgaagtgacgattctgccggac
ggcggagtgcgcgtggtcgatgatggccgaggcattccggtcgacgaagtgccgggcgaa
ggcgtttccggtgtggaaaccgtgatgaccaagctgcacgcaggcggcaagttcggtggc
ggcggctacgcggtctccggcggtctgcacggcgtgggtatttccgtggtgaacgcgttg
tcgacccgcgtcgacatcgaagtgcgccgtcagggcttccactggacccagacctacatc
aaccagaagccgacctcgcgtctgctcaagggcgaaccgatgggcgaagacgaatccacc
ggcacttccgtgaccttctgggccgacggcgcgatcttcgaaaccaccacctacgatttc
gagattctgcgtaaccgcttccagcagatggcattcctcaacaagggactgaagctgtcc
ctaaccgatctgcgtgaaccggaccaagcaggagacgaagtcgcaggcgacggtgacgac
aatgccgaaccgaagcatcagacagtcacctaccagtacaacgacggcatcaaggattac
gtcgattacttggtgaagtcccgcaaggcaaccccgattgaaccggatgtcatcgatttc
gaagcggaagatctgaaaatcggcatttccgcggaaatcgccatgcagtggaccaccgca
tactccgaagcggtgcacaccttcgccaacaccatctccaccaccgaaggcggcacccac
gaagaaggcttccgtgcggctctgacttcgctcgtcaatcgttacgcacgtgagaagaac
atcctcaaagacaaggatgagaacctctccggcgacgacgtgcgcgaaggcctgaccgca
gtggtgtcggtgaagctcaccaccccgcagttcgaaggccagaccaagaccaagctcggc
aattccgaagcgaaaaccttcgtgcagcgcgtgatgaccgacaagctcggcgactggttc
gattcgcatcctagcgaagccaagaacatcatccagaaggccattgaagcctcccgtgcg
cgtcttgcagccaagaaggcacgtgagaatacccgccgcaagtcaatcttcgaatccgcg
ggcatgccagacaaactgaaggattgccagtccaacaatcctgaagaatgcgaactgttc
atcgtggagggtgactccgcaggcggctccgcaattcagggacgcaacccgatcacgcag
gccattctgccgctgcgaggcaaaatcctcaacaccgagcgtgcaagccttgaccgcatg
atgaagtccgaaaccatcgaatcgctgatcaccgcggtcggcggcggttacggcgaggat
ttcgacctgaacaaagtccgctatcacaaggtcatcatcatggccgatgctgatgtggac
ggcgcgcatatcgcaaccctgaatctgacgctgttcttccgctacatgcgcccgatgatt
accgctggttacgtgtatgtggccatgccgccgctgtaccgactcaagtggaccaaaggc
gcgcacgacttcgtgtacaccgacgccgaacgcgaccgcgtgctcgccgaaggcaaggcc
gccggccgtcagttgccgaagggcgaaggcatccagcgttacaagggtctgggtgaaatg
agctaccaggaactgtgggaaaccaccatggatcctgaccaccgcattctgaagcaggtg
caaatcgaagacgcggctgcagccgacgaaaccttctccatgctcatgggcgacgaagtc
gaacctcgccgtctgttcatccagcgcaacgcacgcaacgtcagctggatcgacgcgtag
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