Burkholderia cepacia DDS 7H-2: DM42_197
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Entry
DM42_197 CDS
T03302
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bced
Burkholderia cepacia DDS 7H-2
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bced03016
]
DM42_197 (truB)
Enzymes [BR:
bced01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DM42_197 (truB)
Transfer RNA biogenesis [BR:
bced03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DM42_197 (truB)
Prokaryotic type
DM42_197 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AIO49377
LinkDB
All DBs
Position
1:complement(223836..224768)
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AA seq
310 aa
AA seq
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MTNAAPQRPRVPRRVLDGVLLLDKPVGLSSNDALIRAKRLLLAKKAGHTGTLDPLASGLL
PLCFGEATKFSQDLLDADKTYEATMRLGQRTATGDAEGDVIDTRPVECDRAAVEAALVRF
TGDIVQVPPMYSALKRDGKPLYEYARAGQTVEREGRNVTIHALDLLACELPDVTFRVTCS
KGTYVRTLAEDIGEALGCGAHLTMLRRTGVGALTLEHAVTLDALSDAAEAARDAWLQPVD
ALLSTFPAIRLDDASAKRFLHGQRLPLSALEPIDAADGERVRVYDATRLLGVARKANGVL
APERLVVTAQ
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatgcagcaccccaacgtccgcgcgtgccccggcgcgtgctggacggcgttctc
ctgctcgacaagccggtcggcctgtcgagcaacgatgcgctgattcgcgcaaagcgcctg
cttctcgcgaagaaagccggtcacaccggcacgctcgatccgctggcttctggcctgttg
ccgctgtgcttcggcgaggcgacgaagttctcgcaggacttgctcgacgccgacaagacg
tatgaagcgacgatgcgtctcggccagcgcacggccaccggtgacgcggaaggcgacgtg
atcgacacgcggccggtcgaatgcgatcgtgcggcggtggaagccgcgctcgtgcgcttc
accggcgacatcgtgcaggtgccgccgatgtattcggcgctcaagcgcgacggcaagccg
ctgtacgaatatgcgcgggccggccagaccgtcgagcgggaaggccgcaacgtgacgatt
catgcgctcgatctgctcgcctgcgagctgcccgacgtgacgtttcgcgtgacctgcagc
aagggcacgtatgtgcgcacgctggcggaggatatcggcgaggcgctgggttgcggcgcg
catctgacgatgctgcgtcgcacgggcgtcggcgcgctgacgctcgagcatgcggtgacg
ctcgatgcgctgtcggacgctgccgaagcggcgcgcgatgcatggctgcagccggtcgat
gcgttgctgtcgacgttcccggccattcggctcgacgacgcgtccgcgaagcggttcctg
catggtcagcgcctgccgctgtcggcgctggagccgatcgacgcggccgatggcgagcgc
gtgcgtgtgtatgacgcgacgcggttgctcggcgtggcgcgcaaggcgaatggcgtgctc
gccccggaacggctggtcgtgacggcgcaatga
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