KEGG   Burkholderia cepacia DDS 7H-2: DM42_631
Entry
DM42_631          CDS       T03302                                 
Symbol
traD
Name
(GenBank) conjugative coupling factor TraD, PFGI-1 class
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
bced  Burkholderia cepacia DDS 7H-2
Brite
KEGG Orthology (KO) [BR:bced00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bced02044]
    DM42_631 (traD)
Secretion system [BR:bced02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   DM42_631 (traD)
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind DUF87 TniB
Other DBs
NCBI-ProteinID: AIO47502
LinkDB
Position
1:715186..717372
AA seq 728 aa
MSGKQPVEVLLRPAVELYTVAACAGAAFLSLVAPWSLALSPAMGVGSALAFGAYGAIRYR
DARVILCYRRNIRRLPRYVMTSKDVPVSQQRLFVGRGFLWEQKHTHRLMQTYRPEFRRYV
EPTPAYRLARRLEERLEFAPFPLSRLSKLTGWDVPFNPVRPLPPVGGLPRLHGIEPDEVD
VSLPLGERVGHSLVLGTTRVGKTRLAELFVTQDIRRRNAAGEHEVVIVIDPKGDADLLKR
MYVEAKRAGREGEFYVFHLGWPDISARYNAVGRFGRISEVATRIAGQLSGEGNSAAFREF
AWRFVNIIARALVELGQRPDYMLIQRHVINIDALFIEYAQHYFAKTEPKAWEVIVQIEAK
LNEKNIPRNMIGREKRVVALEQYLSQARNYDPVLDGLRSAVRYDKTYFDKIVASLLPLLE
KLTSGKISQLLAPNYSDLADPRPIFDWMQVIRKRAVVYVGLDALSDAEVAAAVGNSMFSD
LVSVAGHIYKHGIDDGLPGASAGTRVPINVHADEFNELMGDEFVPLINKGGGAGLQVTAY
TQTLSDIEARIGNRAKAGQVIGNFNNLFMLRVRETATAELLTRQLPKVEVYTTTIVSGAT
DSSDIRGATDFTSNTQDRISMSSVPMIEPSHVVALPKGQCFALLQGGQLWKVRMPLPAPD
PDEVMPQDLQQLAGYMRQSYSEATQWWEFTSSPALQDGALPDDLLDDAAAAEPGPVATDD
SAGNEASP
NT seq 2187 nt   +upstreamnt  +downstreamnt
atgtcggggaaacagccggtcgaggttctgcttcgcccagcggtggagctatataccgtc
gcggcgtgtgcaggcgccgcgtttctgtccctggtggccccgtggtcgctcgcgctgagc
cccgccatgggtgtcggcagcgcgctggcgttcggagcctatggcgcgatccgctaccgc
gatgcccgcgtcatcctgtgctaccggcgcaacatccgtcgcctgccgcgctacgtgatg
accagcaaggacgtgccggtcagccagcaacgtctgtttgtgggacgcggctttctgtgg
gagcagaaacacacccataggctcatgcagacgtaccggccagagtttcggcgctacgtc
gagccgacgccggcctatcggctggcccggcgcctggaggaacggctggagttcgcgccg
ttcccgctgtcccggctatcgaaactcaccggctgggacgtgcctttcaatccggtgcgg
ccgctgccgccagtgggcggcctgccgcgcctgcacggcatcgaacccgacgaggtggac
gtcagcctgccgctgggtgagcgcgtgggccactccttggttttgggaacgacaagggtg
ggcaaaacacgtttggccgaactcttcgtcactcaagacatccgccggaggaacgccgcg
ggcgaacacgaggtcgtgatcgtcatcgaccccaaaggagatgccgatctcctgaagcgg
atgtatgtcgaggccaagcgcgcgggccgcgaaggcgagttctatgtcttccatttgggg
tggccggacatttcggcacgctacaacgccgtaggccgattcggtcgcatctcggaagtc
gccacccgcatcgcggggcagctctccggcgaaggcaacagcgcagccttcagggaattc
gcgtggcgcttcgtcaacatcattgcccgcgccttggtggaactggggcagcgcccggac
tacatgctgatccagcggcacgtcatcaacatcgacgcgctgttcatcgagtacgcccag
cactacttcgccaagaccgagcccaaagcctgggaggtgatcgtccagatcgaggccaag
ctcaacgagaagaacatcccgcgcaacatgattgggcgcgagaagcgcgtggtggcgctg
gagcagtacctatcccaggcccgtaactacgacccggtgctcgacggcctgcgctcggcg
gttcgctacgacaagacgtatttcgacaagatcgtcgcgtctttgctgccgctgctggag
aagctcaccagcgggaagatttcccagcttctggcgccgaactattccgacctggccgac
ccccgcccgatcttcgattggatgcaggtcatccgaaagcgcgcagtcgtctatgtgggc
ctggacgcgctatccgatgccgaggtcgccgcagcggtcggcaactcgatgttcagcgat
ctcgtttcggtggcaggccatatctacaagcacgggatcgatgacggcctgccgggcgca
tcggctggcacgcgcgtgccgatcaacgtccacgcggatgaattcaatgaactgatgggt
gacgagttcgtgccgctgatcaacaaaggcggcggcgccggtctgcaggtcaccgcgtac
acgcagacgctttcggacatcgaggcccgtatcgggaaccgcgccaaagcgggtcaagtg
attggcaatttcaacaatctgttcatgctgagggtcagggagacggccaccgccgaactg
ctgacccggcaattgccgaaggtcgaggtctatacgaccaccatcgtctccggcgcgacc
gacagctcggacatccgcggcgcgacggacttcaccagcaacacgcaggaccgcatcagc
atgtccagcgtgccgatgatcgagccgtcgcacgtcgtcgccttacccaagggccaatgt
ttcgcattgttgcagggcggccagctttggaaggttcgcatgccgctgccggcaccggac
cccgatgaggtcatgccgcaggatctgcaacaactggcgggctacatgcgccagagctac
agcgaggccacgcagtggtgggagttcaccagttccccggcgttgcaggacggggccttg
cccgacgacctgttggatgatgccgctgcggccgaacctggcccggtggccaccgacgac
agcgccggcaatgaggcctcgccatga

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