Burkholderia cenocepacia DDS 22E-1: DM39_4452
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Entry
DM39_4452 CDS
T03308
Name
(GenBank) bacterial regulatory , Fis family protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcen03000
]
DM39_4452
Transcription factors [BR:
bcen03000
]
Prokaryotic type
Helix-turn-helix
Other families
DM39_4452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
PAS_4
AAA_5
HTH_30
PAS
AAA_2
HTH_28
HTH_29
PAS_9
HTH_23
HTH_17
HTH_1
PAS_8
Mg_chelatase
AAA_16
AAA
HTH_22
Xre-like-HTH
HTH_20
HTH_24
HTH_Tnp_ISL3
Mga
HTH_11
HTH_7
AAA_3
HTH_50
ATPase
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AIO36863
UniProt:
A0A088UHS3
LinkDB
All DBs
Position
2:1229735..1231666
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AA seq
643 aa
AA seq
DB search
MQDYFPSGQRVPDRLQAARLIRERLRSDGVLPQGYLRIEIDQSWRRSLDHGVRWDDDARL
NLHEFCNLDELRDANRLLLDAAAPELDFLAERCGRDGMILLADARATILSVEGDASHLAA
MGIGDIRAGASWCESLRGTNALGTALVEGRPVAIDSGEHFLGRLSRFSCRSQPLRDPHGN
TIGVLDLTREGELPLTLDGMSMLMSAAATHIETRLFDAYFPEHVVLRFHPRRTYLESSWS
GVLAVAEDGRIVAANAHACELLGIARDTLVGHRCENASPARLPSFIAFAEQGGMLRVEGV
DAAFHCKALRMPRASRVPALRARTPAPAADARSDAGAAALAALAGRQPRLLRALTMARQG
LNNGLPILVQGETGTGKEVVARALHDASVRAGKPFVAVNCASIPEGLIESELFGYRDGAF
TGARKGGMTGRLMQAHGGTLFLDEIGDMPLQLQARLLRVLQERKVAPLGAGDEQAVDIAV
ICATHRDLQTMVHDKTFREDLYYRVHGVNVLLPALRERDDVDLIVAALLARLGAPQLSIS
AELAEVFRQHRWPGNIRQLEMVLRTALAVRADHEHELGLDHLCDGFIDGVCPPPDGSPGL
IRRHEDELIRESLARHGGNVAAAAQTLGISRATLYRRLKRLQP
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagactacttcccttccggccaacgagttccggaccggctgcaagcggcccgcctg
attcgcgaacggctgcgttcggacggcgtgcttccgcaaggctacctgcgcatcgaaatc
gaccagtcatggcggcgcagcctcgaccacggcgtgcgctgggacgacgacgcgcggctg
aacctgcatgaattctgcaatctcgacgaactgcgcgacgcgaaccgcctgctgctcgac
gcggccgcgccggaactcgacttcctcgccgagcgctgcggacgcgacgggatgatcctg
ctggccgatgcgcgcgcaaccatcctgtcggtcgaaggcgacgcgagccacctcgccgcg
atgggcatcggcgacatccgcgccggcgcgagctggtgcgaatcgctgcgcggcaccaat
gcgctcggcaccgcgctcgtcgaaggccgtccggtcgcgatcgacagcggcgaacatttt
ctcggccggctgagccgcttctcgtgccgctcgcagccgctgcgcgacccgcacggcaac
acgatcggcgtgctcgacctgacgcgcgaaggcgaactgccgctcacgctcgacgggatg
tcgatgctgatgagcgcggcggccacccatatcgagacgcggctgttcgacgcgtatttc
cccgagcatgtcgtgctgcgcttccatccgcgccgcacctatctcgaatcgagctggagc
ggcgtgctcgcggtcgcggaagacggccgcatcgtcgcggccaacgcgcatgcgtgcgag
ctgctcggcatcgcgcgcgacacgctcgtcggccaccgctgcgaaaacgcgtcgcccgcg
cgcctgccgtcgttcatcgcattcgccgagcaaggcggcatgcttcgcgtcgaaggcgtc
gacgccgcgttccactgcaaggcgctgcgcatgccgcgcgcgtcgcgcgtgccggcgctg
cgcgcgaggacgccggcgccggcggccgacgcgcgcagcgatgcgggcgcggccgcgctc
gccgcgctggcgggccgccagccgcgcctgctgcgtgcactgacgatggcgcggcagggc
ctcaacaacgggctgcccatactcgtgcagggcgagacgggcaccggcaaggaggtcgtc
gcgcgcgcactgcacgatgcgagcgtacgcgccggcaagccgttcgtcgcggtgaactgc
gcgtcgattcccgaagggctgatcgagtccgagctgttcggctatcgcgacggcgccttc
accggcgcgcgcaagggcggcatgacgggccggctgatgcaggcgcacggcggcacgctg
tttctcgacgagatcggcgacatgccgctgcaactgcaggcgcgcctgctgcgcgtgctg
caggagcgcaaggtcgcgccgctcggcgcgggcgacgagcaggccgtcgacatcgcggtg
atctgcgcgacgcaccgcgacctgcagacgatggtgcacgacaagaccttccgcgaggat
ctctactaccgcgtgcacggcgtgaacgtgctgctgcccgcgctgcgcgaacgcgacgac
gtcgacctgatcgtcgccgcgctgctcgcgcggctcggcgcgccgcagctaagcatcagc
gccgagctcgccgaagtgttccgccagcatcgctggccgggcaacatccgccagctcgaa
atggtgctgcgcaccgcgctcgccgtgcgcgccgatcacgagcacgaactcggcctcgat
catctgtgcgacggcttcatcgacggcgtgtgtccgccgccggacggctcgccggggctg
atccgccgccacgaggacgagctgatccgcgaatcgctcgcgcgccacggcggcaatgtc
gcggctgccgcgcagacgctcggcatcagccgcgcgacgctgtatcgccggctcaagcga
ctgcagccatga
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