Burkholderia cenocepacia DDS 22E-1: DM39_4582
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Entry
DM39_4582 CDS
T03308
Symbol
gmr
Name
(GenBank) cyclic di-GMP phosphodiesterase Gmr
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Pathway
bcen02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DM39_4582 (gmr)
Enzymes [BR:
bcen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
DM39_4582 (gmr)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
Motif
Other DBs
NCBI-ProteinID:
AIO35948
UniProt:
A0A088UFA2
LinkDB
All DBs
Position
2:complement(1369683..1371686)
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AA seq
667 aa
AA seq
DB search
MDDENDSAVLEAHVGTRSPCWRLGSDSNALELAAVRGMTNISVALAADQAARIRALTGVT
SHLVLDIALFGHPVALHLVGRKVNTTDWAGTASAYSDTVSVAGDLAHGLAFAEQVVSEVN
SLVVILDRNGMVQRFNRLCEEVTGKREVDVIGRSAFELFMSPEQGAQSRSNITGFFASNQ
AFAVERYINTVNGPRLFQFRNKFVQSGSGVDEQFLICSGIDITEERNAQQRLIELANTDV
LTGLPNRHAISERIHAVIAEQSRDKPGQIGILFLDLDNFKRVNDHYGHITGDRLLQDVSA
IISGCLPSGATLARLGGDEFLVLFENGTRALLEATAQIILERLRTPIHLGLMEVYTSCSI
GIAMHPQHGDSLETLIRNADTAMYVAKEAGKHTYRVFSLEMNQRVAKYMWLDTNLRKALE
EEQFVLHYQPVVDIATGDVHAVEALIRWQSPDRGLVAPVEFIRFAEESGLIAPLGRWVMR
TAAAQAAAWKAKGLGVRIAVNVSARQLQDMNIVHQFASILDSAGLKPGLLDIELTESCFI
EDEDAAHGLMKRFRQLGAQVHLDDFGTGYSSLSQLSRLPLDAIKLDRSFITGIDRNPRSQ
ALVRSVVSLANALNFSVIAEGVETHEEAAFLKQIDVGHAQGYYYARPMAAQAFEAWLAET
RKLRLIA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaaaacgatagcgcggtgctcgaggcgcatgtcggtacgcgcagcccctgc
tggcgtctaggcagcgacagcaacgcgctcgaactcgccgccgtgcgcggcatgaccaat
atcagtgtcgcgctggcggccgatcaggccgcgcggatccgcgcgctgacgggcgtcacg
tcgcacctggtgctcgacatcgcgctgttcggccatccggtggcgctgcatctggtcggc
aggaaggtcaacacgaccgactgggccggcaccgcttccgcgtattccgacaccgtgtcc
gtggcgggcgatctcgcgcacgggctggcgttcgcggagcaggtcgtctccgaggtgaac
tcgctcgtcgtgatcctcgaccgcaacggcatggtgcagcgcttcaaccgcctgtgcgag
gaagtgaccggcaagcgcgaggtcgacgtgatcggccgcagcgcgttcgagctgttcatg
agccccgagcagggcgcgcagtcgcgcagcaacatcaccgggttttttgcgagcaaccag
gcgttcgcggtcgagcgctacatcaataccgtcaacgggccgcgcctgttccagttccgc
aacaagttcgtgcagagcggcagcggcgtcgacgagcagttcctgatctgttcgggcatc
gacatcaccgaggagcgcaacgcgcagcagcggctcatcgagctcgcgaacaccgacgtg
ctgaccgggctgccgaaccgccatgcgatcagcgagcgcatccatgcggtgatcgcggag
cagagccgcgacaagccgggccagatcggcatcctgttcctcgatctcgacaacttcaag
cgcgtcaacgaccactacggccacatcaccggcgaccggctgctgcaggacgtgtcggcg
atcatcagcggctgcctgccatcgggtgcgacgctcgcgcggctcggcggcgacgaattc
ctcgtgctgttcgagaacggcacgcgcgcgttgctcgaagcgaccgcgcagatcatcctc
gaacggctgcgcacgccgatccatctcgggctgatggaggtctacacgagctgctcgatc
ggcatcgcgatgcatccgcagcacggcgactcgctcgagacgctgatccgcaacgccgat
accgcgatgtacgttgcgaaggaagccggcaagcacacgtaccgcgtgttctcgctggag
atgaaccagcgggtcgcgaagtacatgtggctcgacacgaacctgcgcaaggcgctcgag
gaagagcagttcgtgctgcactaccagcccgtcgtcgatatcgcgacgggcgacgtgcat
gcggtcgaggcgctgatccgctggcagtcgcccgatcgtgggctggtcgcgccggtcgag
ttcatccgtttcgcggaagagtcgggcctgatcgcgccgctcgggcgctgggtgatgcgc
acggccgccgcgcaggctgccgcgtggaaggcgaaggggctcggcgtgcggatcgcggtg
aacgtttccgcacggcagttgcaggacatgaacatcgtccaccagttcgcgtcgatcctc
gacagcgccgggctgaagccgggcctgctcgacatcgagctgaccgagagctgcttcatc
gaggacgaggatgccgcgcacgggctgatgaagcggttccgccagctcggcgcgcaggtc
catctcgacgatttcggcaccggctattcgtcgctgtcgcaactgtcgcggctgccgctc
gacgcgatcaagctcgatcgcagcttcatcaccggcatcgaccgcaatccgcgctcgcag
gcgctggtgcgctcggtcgtgtcgctcgcgaatgcgctcaatttctcggtgatcgccgaa
ggcgtcgagacacacgaggaagccgcgttcctgaagcagatcgacgtcggccacgcgcag
ggctactactacgcacggccgatggcggcccaggcattcgaggcctggctcgcggagacg
agaaagctcaggctgatcgcctga
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integrated database retrieval system
