Burkholderia cenocepacia DDS 22E-1: DM39_6587
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Entry
DM39_6587 CDS
T03308
Name
(GenBank) bacterial regulatory helix-turn-helix , lysR family protein
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcen03000
]
DM39_6587
Transcription factors [BR:
bcen03000
]
Prokaryotic type
Helix-turn-helix
LysR family
DM39_6587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AIO30790
UniProt:
A0A088TZS9
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All DBs
Position
3:410716..411966
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AA seq
416 aa
AA seq
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MDHTELPNLACLHAVQRVADTGSVSRAAATLFRAQSAVTRAVQEIEAALGEPLFERKPSG
MLATPVGRAVLKRAERVFAELGELANWCALRQSRRRAPADGGLPAYLLNTRRLQLFSTLA
RHRHMPSAARTLGVTQPAVSSAIRILESGAGFALFHRHPRGLLLTADGETFLLHVRRALN
ELRHVADDVAALHGSIQGVVTVGALPLGRTLILPEAVARVVTRFPKVRVITDESAYEALV
AGVRAGDIDFILGALRASDPASGLENERLMSENLVVLARHDHPLAAVRNLSLRSLADAQW
ILPRSHAPARGLFDTLFRRTKLKPPMPTVETADLAVIRGLLLHTDMLAVLSAQQLHYECE
SGLLAVLDVPMRETTRDIGLITRSGSPPSPAARALIDAIRLVATEVARTPRATAAQ
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggaccacaccgaactcccgaatctcgcctgcctgcacgcggtgcagcgcgtcgccgac
accggcagcgtcagccgcgcggccgcgacgctgtttcgcgcgcagtcggccgtcacgcgc
gccgtacaggaaatcgaagcggcgctcggcgagccgctgttcgagcgcaagccgtccggc
atgctcgcgacgccggtcgggcgcgcggtgctcaagcgcgccgagcgcgtgttcgccgag
cttggcgaactggcgaactggtgcgcgctgcgccagtcgcgccgacgcgcgccggccgat
ggcgggctgccggcctacctgctcaatacgcggcggctgcagttgttctcgacgctcgcg
cggcaccggcacatgccgagcgccgcgcgcacgctcggcgtcacgcagccggccgtcagc
agcgcgatccggattctcgaaagcggcgcgggcttcgcgctgtttcatcgccatccgcgc
ggcctgctgctgaccgccgacggcgaaaccttcctgctgcacgtgcgccgcgcgctgaac
gaactgcgtcacgtcgccgacgacgtcgccgcgctgcacggcagcatccagggcgtcgtg
accgtcggcgcactgccgctcggccgcacgctgatcctgccggaagccgtcgcgcgcgtg
gtcacgcgctttccgaaggtgcgcgtgatcaccgacgaaagcgcgtacgaggcgctcgtc
gccggcgtgcgcgcgggcgacatcgacttcattctcggcgcgctgcgcgcgagcgatccg
gcgagcggcctggagaacgagcggctgatgtccgagaacctggtggtcctcgcgcggcac
gaccatccgctcgcagccgtgcgcaacctcagtctgcgcagcctcgccgatgcgcagtgg
atcctgccgcgcagccatgcgcccgcgcgcggcctgttcgacacgctgttcaggcgaacc
aagctgaagccgccgatgccgacggtcgagacggccgacctcgcggtgatccgcgggctg
ctgctgcataccgacatgctggcggtgctgtccgcgcagcagttgcattacgagtgcgaa
tcggggctgctcgcggtgctcgacgtcccgatgcgcgaaacgacgcgcgacatcggcctg
atcacgcgcagcggcagcccgccgtcgccagccgcgcgcgcgctgatcgacgcaattcgc
ctcgtcgcgaccgaagtcgcgcgcacgccccgcgcgaccgccgcgcaataa
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