Burkholderia cenocepacia H111: I35_4821
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Entry
I35_4821 CDS
T03804
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bceo
Burkholderia cenocepacia H111
Pathway
bceo03030
DNA replication
bceo03410
Base excision repair
bceo03420
Nucleotide excision repair
bceo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bceo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I35_4821 (polA)
03410 Base excision repair
I35_4821 (polA)
03420 Nucleotide excision repair
I35_4821 (polA)
03440 Homologous recombination
I35_4821 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bceo03032
]
I35_4821 (polA)
03400 DNA repair and recombination proteins [BR:
bceo03400
]
I35_4821 (polA)
Enzymes [BR:
bceo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I35_4821 (polA)
DNA replication proteins [BR:
bceo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
I35_4821 (polA)
DNA repair and recombination proteins [BR:
bceo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
I35_4821 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I35_4821 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
CDN62657
LinkDB
All DBs
Position
2:906387..908999
Genome browser
AA seq
870 aa
AA seq
DB search
MLRRMRKEVSAEYSACVFDAKGKTFRDDLYADYKANRPSMPPDLALQVEPIHGAVRALGW
PLLMVEGVEADDVIGTLAREAERHGMNVIVSTGDKDLAQLVTERVTLVNTMTNETLDRDG
VLAKFGVPPERIIDYLALIGDTVDNVPGVEKCGPKTAVKWLSQYESLDGVIAHAADIKGV
VGDNLRRALDFLPLGRKLVTVDTSCDLAPHLESIEASLKTDGEARELLRDIFARYGFKTW
LREVENAPAEGGGADAPEGEPAPVIATDVVREYDTIQTWEQFDAWFAKIDAAALTAFDTE
TTALDPMLARLVGLSFSVEPGKAAYLPVAHRGPDMPEQLPLDEVLARLKPWLESADRKKV
GQHLKYDAQVLANYDIELNGIEHDTLLESYVVESHRTHDMDSLALRHLGVKTIKYEDVAG
KGAKQIGFDEVALAQAAEYAAEDADITLQLHHALYPQVAREPGLERVYREIEMPVSLVLR
KMERTGVLIDDARLHAQSTEIATRLIELEGQAYELAGGEFNLGSPKQIGQIFFEKLQLPV
VKKTPSGAPSTDEEVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMVNPTTGRVHTN
YAQAVAVTGRLASNDPNLQNIPVRTAEGRRIREAFIAAPGHRIVSADYSQIELRIMAHIS
GDASLLRAFSQGEDIHRATAAEVFGVTPLEVNSDQRRIAKVINFGLIYGMSAFGLASNLG
ITRDAAKLYIDRYFARYPGVAQYMEDTRATAKEKGYVETVFGRRLWLPEINGGNGPRRQA
AERAAINAPMQGTAADLIKLSMIAVDDWLTRDRLASRMIMQVHDELVLEVPEGELSLVRE
KLPEMMCGVAKLKVPLVAEVGAGANWEEAH
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccgtatgcgcaaggaagtcagtgcagagtatagcgcttgcgtgttcgatgca
aagggcaagacgttccgcgacgacctttatgccgactataaggcaaaccgtccgtcgatg
ccgcccgatctcgcattgcaggtcgagccgatccacggcgccgtgcgcgcgctcggctgg
ccgctgctgatggtcgaaggcgtggaggccgacgacgtgatcggcacgctcgcgcgcgaa
gccgaacggcacgggatgaacgtgatcgtgtcgaccggcgacaaggatctcgcgcagctc
gtgaccgagcgcgtcacgctcgtcaacacgatgaccaacgagacgctcgaccgcgatggc
gtgctcgcgaagttcggcgtgccgcccgagcgcatcatcgactatctcgcgctgatcggc
gacaccgtcgacaacgtgccgggcgtcgagaagtgcgggccgaagacggccgtgaagtgg
ctgtcgcaatacgaaagcctcgacggcgtcatcgcgcatgcggccgacatcaagggcgtg
gtcggcgacaaccttcgccgtgcgctcgatttcctgccgctcggccgcaagctcgtgacc
gtcgacacgtcatgcgatctcgcgccgcatctcgaatcgatcgaagcgtcgctgaagacc
gacggcgaggcgcgcgagctgttgcgcgacatcttcgcgcgctacggcttcaagacctgg
ctgcgcgaagtcgagaacgcacccgcggaaggcggtggcgccgatgcgccggaaggcgag
ccggccccggtgatcgcgaccgacgtcgtgcgcgaatacgacacgatccagacctgggaa
cagttcgacgcgtggttcgcgaagatcgacgcggccgcgctgaccgcgttcgacaccgag
acgaccgcgctcgatccgatgctcgcgcggctcgtcggcctgtcgttctcggtcgagccg
ggcaaggcggcctacctgccggtcgcgcaccgcggccccgacatgcccgagcagcttccg
ctcgacgaagtgctcgcgcgcctgaagccgtggctcgaatcggccgatcgcaagaaggtc
ggccagcacctgaagtacgacgcacaggtgctcgcgaactacgacatcgaactgaacggc
atcgagcacgacacgctgctcgaatcgtacgtggtcgaatcgcaccgcacgcacgacatg
gacagcctcgcgctgcgtcatctgggcgtcaagacgatcaagtacgaagacgtggccggc
aagggcgcgaagcagatcggtttcgacgaagtggcgctcgcgcaggccgccgaatacgca
gccgaagatgcggacatcacgctgcagctccatcacgcgctgtatccgcaagtcgcccgc
gagccgggcctcgagcgcgtgtaccgcgagatcgagatgccggtatcgctcgtgctgcgc
aagatggagcgcacgggcgtgctgatcgacgatgcgcgcctgcacgcgcagagcaccgaa
atcgcgacgcgcctgatcgaactcgaggggcaggcgtacgaactggcgggcggcgaattc
aatctcggctcgccgaagcagatcgggcagatcttcttcgagaagctgcagttgccggtc
gtgaaaaagacgccgagcggcgcgccgtcgaccgacgaggaagtgctgcagaagctggcc
gaggactacccgctgccgaagctgctgctcgagcatcgcgggctgtcgaagctgaagtcg
acctataccgacaagctcccgcgcatggtgaatcccaccaccggccgcgtgcatacgaac
tatgcgcaggccgtcgcggtcacgggccgcctggcgtcgaacgatcccaatcttcagaac
attccggtgcgcacggccgaaggccggcgcatccgcgaggcgttcattgcagcgccgggc
caccggatcgtatcggccgactattcgcagatcgaactgcggatcatggcgcacatctcc
ggcgacgcgtcgctgttgcgcgcgttctcgcagggcgaggacattcaccgcgcgacggcc
gccgaggtgttcggcgtgacgccgctggaggtcaattccgaccagcgccggatcgcgaag
gtgatcaacttcgggctcatctacgggatgagcgcgttcgggctcgcatcgaacctcggc
atcacgcgcgacgcggcgaagctctatatcgaccgctatttcgcccgctatccgggcgtc
gcgcagtacatggaagacacgcgcgcaaccgcgaaggagaagggctacgtcgaaaccgtt
ttcggtcgccgcctgtggctgcccgagatcaacggcggcaatggcccgcgccgtcaggcg
gccgagcgcgcggccatcaatgcaccgatgcagggcacggcggccgacctgatcaagctg
tcgatgatcgcggtggacgactggctcacgcgtgaccggcttgcatcgcggatgatcatg
caggtgcacgacgaactggtgctcgaggtgccggaaggcgagctgtcgctcgtgcgcgag
aaactgccggaaatgatgtgcggcgtcgcgaagctgaaggtgccgctggtcgccgaagtg
ggcgccggcgcgaactgggaagaggcacactga
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