KEGG   Burkholderia cenocepacia H111: I35_7581Help
Entry
I35_7581          CDS       T03804                                 

Definition
(GenBank) ATP-dependent DNA ligase clustered with Ku protein, LigD
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
bceo  Burkholderia cenocepacia H111
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bceo00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    I35_7581
Enzymes [BR:bceo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     I35_7581
DNA repair and recombination proteins [BR:bceo03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     I35_7581
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
LinkDB All DBs
Position
3:complement(663982..666768)
Genome map
AA seq 928 aa AA seqDB search
MAGKLDPYRRKRHFGATPEPEGAHGKRRAKAQTKAGTQPNAKPAARAGHPLRFVIQEHHA
RRLHYDFRLELDGTLKSWAVPKGPSFDPQVKRLAVHVEDHPLEYASFEGEIPAGHYGAGS
VVVWDEGTWTPDGGIAHAREGYRAGKLTFRLDGEKLHGGWALVRSGRQEGRQEQWLLIKE
RDDDARSADEFDVVGERPGSVHDGASHGAARKHAARRRGSNGADGANGDARAARRESPES
PESHEGPRPTEPSQVEGAVRAPLPERVAPQLATLVDAPPTQGGWCYELKFDGYRILARIA
GKGARRRVTLMTREGRDWTAKLRAQRDALAALDVDDAWLDGEAVVLGDNGLPDFQALQNA
FGTDRSDTITFFVFDLPYLDGYDLRDAPLTARRALLEPLLANCDPARVRFSPDLGEDIAS
LIASACDTGLEGLIGKRAESRYRAGRSPAWIKLKCRRRQEFVIGGFTEPSGSRHGFGALL
LGVHEPAPAGKRRRGPGPLRYVGRVGTGFDARMLDRLAAILRKHERDTMPFDAPPRERTR
TRVHWVEPTLVAECEFAEWTGDGIVRQAAFIALRDDKPAEQIVREMPTHTETEGAMDQRS
TTQDKPRRASRTDRHASTGQARGARADADTGDDTIGRVRITHPERVLDPQSGTRKLDLAR
YWQWVAPWLLPDLKGRPVSLVRAPGDIAGELFFQKHAERREIPFVTQHEGLDPGHGPLLS
IDSVDALLGAAQMGTVELHTWNAHASNIERPDRIVFDLDPDPALPWRTMIDAAQLVRGLL
DELGLVSFCKTSGGKGLHVVVPLTRHAGWDDVKDFSRAVAQHVAGTLPDRFTATMGPRHR
RGKIFVDYLRNGRGASTIAAYSVRARPGMGVSVPLDWDEVPETTGGAQWTIDTLHERLDT
LKRDPWEGYAKTRQRITAAMRARLGADA
NT seq 2787 nt NT seq  +upstreamnt  +downstreamnt
atggccggcaagctcgatccgtatcgccgcaagcgccatttcggcgcgacgcccgagccc
gaaggcgcgcacggcaagcgtcgcgcgaaggcgcagacgaaagcggggacgcagccaaac
gcgaagcctgccgcacgcgcaggccatccgctgcgcttcgtgatccaggagcaccacgcg
cgccggctgcactacgatttccggctcgaactcgacggcacgctgaagtcgtgggccgtg
ccgaaggggccgagcttcgatccgcaggtgaagcggctcgccgtgcacgtcgaggatcat
ccgctcgaatacgcgtcgttcgaaggcgagattccggccgggcattacggggcggggtcg
gtcgtcgtatgggacgaaggtacgtggacgcccgatggcggcatcgcgcatgcgcgcgaa
ggctatcgggccggcaagctgacgttcaggctcgacggcgaaaagctgcacggcggctgg
gcgctcgtgcgcagcgggcggcaggaggggcgtcaggagcagtggctgctgatcaaggag
cgcgacgacgacgcgcgcagcgccgatgaattcgacgtcgtcggcgagcggccggggagc
gtgcatgacggtgcgtcccacggcgcggcgcgcaagcatgctgcgcggcgtcgcggatcg
aatggcgcggatggcgcgaatggcgatgcacgtgccgcacgacgcgaaagccccgaaagc
cccgaaagtcacgaaggcccgcgccccaccgaaccgtcgcaagtcgaaggcgcggtgcgc
gcgccgctgcccgagcgcgtcgcgccgcaactcgcgacgctggtcgatgcgccgccgact
cagggcggctggtgctacgaactgaagttcgacggctatcgaatcctcgcgcgcattgcc
gggaagggcgcgcgtcgacgcgtcacgctgatgacgcgcgaaggccgggactggaccgcg
aagctgcgcgcgcagcgcgacgcgctcgcggcgctcgacgtcgacgacgcgtggctcgac
ggcgaggccgtcgtgctcggcgacaacggcctgccggatttccaggcgctgcagaacgcg
ttcggcacggaccgttcggacacgatcactttcttcgtgttcgatctgccttatctcgac
ggctacgacctgcgcgacgcgccgctcaccgcccgtcgcgcattgctcgagccgctgctc
gcgaactgcgacccggcgcgcgtgcgcttttcgcccgatctcggcgaggacatcgcatcg
ctgatcgcgagcgcctgcgacaccggcctcgaagggctgatcggcaagcgtgcggaatcg
cgctaccgcgccggccgttcgcccgcgtggatcaagctcaagtgccggcgccggcaggag
ttcgtgatcggcggctttacggagccgtcgggcagccggcacggcttcggcgcgctgctg
ctcggcgtgcacgaaccggcgccggccggcaaacggcgacgcgggccggggccgctgcgc
tacgtcggccgcgtcggcaccggcttcgacgcgcggatgctcgaccgtctcgccgcgatc
ctgcgcaagcacgagcgcgacacgatgccgttcgatgcgccgccgcgcgaacgcacgcgc
acgcgcgtgcactgggtcgagccgacgctcgtcgccgaatgcgaattcgcggaatggacc
ggtgacggcatcgtgcggcaggccgcgttcatcgcgttgcgcgacgacaagccggcggag
cagatcgtccgcgagatgccgacacacacggaaacggagggggcgatggatcagcgttcg
actacgcaggacaagccgcggcgtgcgtcgcgcaccgatcgtcacgcgagcacgggccag
gcgcgcggcgcgcgcgccgatgccgataccggcgacgatacgatcggccgcgtgcgcatc
acgcatcccgagcgcgtgctcgatccgcaaagcggcacgcgcaagctcgatctcgcgcgg
tactggcaatgggtcgcaccgtggctgttgcccgacctgaaaggccggcccgtgtcgctc
gtgcgcgcacccggcgacatcgccggcgaactgttcttccagaagcacgcggaacgccgc
gagattccgttcgtcacgcagcacgaaggactcgacccgggccacgggccgctgctgtcg
atcgacagcgtcgacgcgctgctcggcgccgcgcagatgggcacggtcgagctgcatacg
tggaacgcgcacgcgtcgaacatcgagcggcccgaccgcatcgtgttcgacctcgatccc
gacccggcgctgccgtggcgcacgatgatcgacgccgcgcagctcgtgcgcgggctgctc
gatgaactcgggctcgtatcgttctgcaagacgagcggcggcaaggggctgcacgtcgtc
gtgccgctcacgcggcatgcgggctgggacgacgtgaaggacttttcgcgcgcggtcgcg
cagcacgtcgccggcacgctgcccgaccgtttcaccgcgacgatggggccgcgccaccgg
cgcggcaagatcttcgtcgactatctgcgcaacggccgcggcgcgagcacgatcgccgcg
tattcggtgcgcgcgcggcccggcatgggcgtgtcggtgccgctcgactgggacgaggtg
cccgagacgaccggcggcgcgcaatggacgatcgacacgctgcacgaacggctggatacg
ctgaagcgcgacccgtgggaaggttatgcgaagacgcgccagcgcatcaccgcggcgatg
cgcgcgcggctcggcgccgatgcgtga

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