KEGG   Burkholderia cepacia ATCC 25416: APZ15_36520Help
Entry
APZ15_36520       CDS       T04772                                 

Definition
(GenBank) DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
bcep  Burkholderia cepacia ATCC 25416
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bcep00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    APZ15_36520
Enzymes [BR:bcep01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     APZ15_36520
DNA repair and recombination proteins [BR:bcep03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     APZ15_36520
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
3:complement(972612..975392)
Genome map
AA seq 926 aa AA seqDB search
MAAKLDPYRRKRRFDATPEPEGAHGRRRAPADADARQSRKAGTSARTARPLRFVIQEHHA
RRLHYDFRLELDGTLKSWAVPKGPSVDPAVKRLAVHVEDHPLEYASFEGEIPAGHYGAGS
VVVWDEGTWTPDGGVAQARAGYRAGKLTFRLDGAKLHGGWALVRSGRQQGRQEQWLLIKE
RDDDARDAAAFDVVAQRPGSVHDGHTQAARGKGNGAVPPPARAARRGHGNAPGTHDGDAG
SPSTDLSRMDGAVRAALPERIAPQLATLVDAPPAHGDWRYEVKFDGYRILARIAGRGARR
HVTLMTREGRDWTAKLRAQRDALAALEVDNAWLDGEAVVLRENGLPDFQALQNALGAGRS
DSVTLFVFDLPFLDGYDLRDVPLAARRALLEPLLDGCDPARLRFSPDLGDDVVPLIAHAC
DTGLEGLIGKRAESRYRGGRSPAWIKLKCRRRQEFVIGGYTEPAGSRHGFGALLLGVHAP
DAGGKRSRGTPPLRYVGRVGTGFDTRLLDRLAAMLRKHERDTTPFDPPPHERSRTRVHWV
EPTLVAECEFAEWTGDGIVRQASFIALREDKPARRIVREVPRHTESETTMDEPQAAHGNP
HAPHTDTGHDRRPRARTHASAGRAPGEPGVDHVDRVRITHPDRVLDPRSGTRKIDLAHYW
SWVAPWLLPDLKGRPVSLVRAPGDIAGELFFQKHAERREIPFVRQHEGLDPGHGPLLSID
SVDALLGAAQMGTIELHTWNAHASNIERPDRIVFDLDPDPALPWRAMIDAAQIVRGLLDE
LGLVSFCKTSGGKGLHVVVPLTRHAGWDDVKDFSRAVAQHVAATVPERFTATMGPRHRRG
RIFVDYLRNGRGASTIAAYSLRARPGMGVSVPLEWDEVPATTGGAQWTIDTLRERLDALK
RDPWEGYAHTRQRITASMRARLGAQT
NT seq 2781 nt NT seq  +upstreamnt  +downstreamnt
atggccgcgaaactcgacccctatcgccgcaaacgccgcttcgacgcgacgccggagccc
gagggcgcgcacgggcggcggcgcgcgcccgccgacgcggacgcgcggcagtcgcggaag
gcgggaacgtccgcgcgcacggcccggccgttgcgcttcgtgatccaggagcaccacgcg
aggcggctgcactacgacttccgtctcgaactcgacggcacgctgaaatcgtgggccgtg
ccgaaagggccgagcgtcgatccggcggtgaaacggctggccgtgcacgtcgaggaccat
ccgctcgaatacgcgtcgttcgaaggcgagattccggccggacattacggtgcgggctcg
gtcgtcgtgtgggacgaaggaacgtggacgcccgacggcggcgtcgcgcaggcacgcgcg
ggctaccgtgccggcaagctgacgttccggctcgacggcgcgaagctgcacggcggctgg
gcgctggtgcgcagcgggcggcagcaggggcgccaggagcaatggctgctgatcaaggaa
cgcgacgacgacgcgcgcgatgcggcggcgttcgatgtcgtcgcgcagcggccgggcagc
gtgcatgacgggcacacgcaggccgcgcgcgggaaggggaacggcgcggtgccgccccct
gcgcgtgccgcgcggcgcggccacggcaacgcgccgggcacgcacgacggcgacgcgggc
agtccgtcgacagacctgtctcgcatggacggcgccgtgcgcgcggcgttgcccgagcgc
atcgcgccgcaactcgcgacgctggtcgatgcgccgcctgcgcacggcgactggcgctac
gaagtgaaattcgacggttaccggatcctcgcgcggatcgccggtcgcggcgcgcggcgg
cacgtcacgctgatgacgcgcgaaggccgcgactggaccgcgaagctgcgtgcgcagcgc
gatgcgctcgccgcgctcgaggtcgacaacgcatggctcgacggcgaagccgtcgtgctc
cgcgagaacggcctgcccgatttccaggcgctgcagaacgcgctcggcgcgggccgctcg
gactcggtgacgctgttcgtgttcgacctgccgtttctcgacggatacgacctgcgcgac
gtgccgctcgccgcccgtcgcgcgctgctcgagccgctgctcgacggctgcgatccggcc
cggctgcgtttttcacccgacctcggcgacgacgtcgtgccgctgatcgcgcacgcgtgc
gacacggggctcgaagggttgatcggcaagcgcgcggagtcgcgttatcgcggcggccgc
tcgcccgcctggatcaagctgaaatgccggcggcggcaggagttcgtgatcggcggctac
accgagccggcgggcagccggcacggcttcggcgcgctgctgctcggcgtgcatgcgccg
gacgcgggcggcaagcggtcacgcggcacgccgccgttgcgctatgtcggccgcgtcggc
accgggttcgacacgcgcctgctcgaccggctcgcggccatgctgcgcaagcacgagcgc
gacacgacgccgttcgacccgccgccgcacgaacggtcgcgcacgcgcgtgcactgggtc
gagccgacgctcgtcgccgaatgcgaattcgcggaatggacgggcgacgggatcgtgcgg
caggcgtcgttcatcgcgctgcgcgaagacaagccggcgcggcggatcgtccgcgaggtg
ccgcgccataccgaatcggagacgacgatggacgaaccccaggcagcgcatggcaatccg
catgcaccgcataccgataccgggcacgaccgccggccgcgcgcgcgaacgcatgcgtcc
gccggccgcgcgcccggcgaacccggcgtcgatcacgtcgaccgcgtgcgcatcacgcat
cccgatcgcgtgctcgacccgcgcagcggcacgcgcaagatcgacctcgcgcattactgg
tcatgggtcgcaccgtggctgctccccgacctgaaaggccggcccgtatcgctcgtgcgc
gcgccgggcgacatcgccggcgaactgttcttccagaagcatgcggaacgccgggaaatc
ccgttcgtcaggcagcacgaggggcttgatcccggccacggcccgctgctgtcgatcgac
agcgtcgacgcgctgctcggcgccgcgcagatgggcacgatcgagctgcacacgtggaac
gcacacgcgtcgaacatcgagcggcccgaccggatcgtgttcgacctcgatcccgatccg
gcgctgccgtggcgcgcgatgatcgacgccgcgcagatcgtgcgcgggctgctcgacgaa
ctggggctcgtgtcgttctgcaagacgagcggcggcaaggggctgcatgtcgtcgtgccg
ctcacgcggcatgcgggctgggacgacgtgaaggacttctcccgcgcggtcgcgcagcac
gtcgccgctacggtgcccgagcgcttcaccgcgacgatggggccgcgccaccggcgcggc
aggatcttcgtcgactacctgcgcaacggccgcggcgcgagcacgatcgccgcgtactcg
ctgcgggcgcggcccggcatgggcgtgtcggtgccgctcgaatgggacgaggtgcccgct
acgacgggcggcgcgcaatggacgatcgacacgctgcgcgaacggctcgacgcgctgaaa
cgcgacccgtgggaaggttatgcgcacacgcgccagcgcatcacggcgtcgatgcgtgcg
cggctcggggcgcaaacgtga

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