Burkholderia cenocepacia DWS 37E-2: DM40_1876
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Entry
DM40_1876 CDS
T03488
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bcew
Burkholderia cenocepacia DWS 37E-2
Pathway
bcew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DM40_1876 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcew03400
]
DM40_1876 (recB)
Enzymes [BR:
bcew01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DM40_1876 (recB)
DNA repair and recombination proteins [BR:
bcew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DM40_1876 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
UvrD_C_2
DUF374
Motif
Other DBs
NCBI-ProteinID:
AIO41554
UniProt:
A0AA86FLX8
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All DBs
Position
1:2017919..2021623
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AA seq
1234 aa
AA seq
DB search
MSAATRPQAALELDVFACPLDGVNQIEASAGTGKTWNICALYVRLLLEKDLGADEILVVT
FTKAATAELHERIRGRLAQLAHALDTGDDGGDPFVARLVETTLGEAGALDPETAAKRIRR
ALRAFDQAAIHTIHAFCQRALQEAPFAAAMPFAFDMQADDAALRFELAADFWRTRVEPMA
GRWPGFATWLVDSGAGPAALDAQLARRLKKPLAALRWDGVVEPDESAEAAADECFAEAAR
MWADERDAIDALLRTAQPVLNQRSHKPDAVADALAAWSAHFARGNAQAALPKAALKLTRT
ALVKATKKGGATPEHAFFDVADALEAAVAAAEAAQRGRWLALIAEWLDTAPAELAERKRT
RRIVSFDDLLANLYHALHAHPWLADTLRARYPAALIDEFQDTDPLQFAIFDRIFAPGGPL
FLVGDPKQAIYSFRAADLHTYLAARASASACYTLAVNQRSTPAIVDACNRFFMSNPRAFV
LDGLDYYAVRAGTRVRPPFVDETDSGPGGDFRIWSLPGGDGTLLKRDAQAQAAQACAAEI
ARLMRGAREGHARLGDTPLSPGDIAVLVQTHRQGSLVKRVLATWGIGSVELAQASVFSTG
DAEQLERVLAAIDAPGDLRRLRAALAADWFGLDAGALWRMEQGDGDASREAADSADAMSW
VERFSRYRLLWRERGFAVMWRTFTRELRIAERLMAGADGERRVTDINHLAELTQARASAQ
PGIAPTLRWLAAQRLDGGGEEAQLRLESDRNLVQIVTVHKSKGLEYAVVFCPFLNDGALR
EPPASGLPDAREYHDDAGDAVLHYGCDDAAAEHAARQALREQAAERARLVYVALTRAVYR
CYLVAGPYLSSRSTREARRSVLNWLVAGAGQTFDAWLDEPPDEAVLDAAWQALAGGPVSV
APLPVPVRRERLAAGHDASQTLAARHATRVLRDAWRMASFSSLTASMAREEAGVAVVPDD
ELRPDHDALAAVTPDGAFALEDAVATEPPDDDILVFPRGAAAGECLHRLFELSRFAEPDS
WHQAALGALHDRPVEAEPELAARLPAMMARLVGDVVQTELVPGMRLADLDPAKRLDEMGF
LFPAPSLDLGALRRLLVAYGYPDVALDAGMLAGFIKGFIDMIVEHDGRFWIVDWKSNHLG
NTPDAYGPRALDVAMADHAYHLQALLYTVALHRYLRGRLPGYDYDAHIAGYLYLFVRGVR
PDWRSGGEPAGVHARRPARELVDALDRMMEGGRA
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgcaacccggccgcaggcggcgctcgaactcgacgtgttcgcgtgcccgctc
gatggcgtcaaccagatcgaggcgtccgccggtaccggcaagacgtggaacatctgcgcg
ctctacgtgcgcctgctgctcgaaaaggatctcggtgcggacgaaatcctcgtcgtcacg
tttaccaaggcggcaacggcggaattgcatgaacggatccgcgggcggctcgcgcagctc
gcacatgcgctcgataccggcgacgacggcggcgatccattcgtcgcgcggctggtcgag
acgacgctcggagaagcgggcgcgctcgatccggagacggcggcgaagcggatccgccga
gcgctgcgtgcattcgaccaggcggcgatccacacgatccacgcgttctgtcagcgtgcg
ttgcaggaagcgccgttcgcggctgccatgccgttcgcgttcgacatgcaggcggacgat
gcggcgctgcgcttcgaactcgcggcggacttctggcgcacgcgcgtcgaaccgatggcc
ggccgctggccgggcttcgcgacctggctcgtcgattcgggggcggggccggccgcgctg
gatgcgcaactcgcacggcggctgaagaagccgctcgctgcgctgcgttgggacggcgtc
gtcgagccggacgaatcggcggaggccgctgccgacgaatgttttgccgaggccgcgcgg
atgtgggccgacgagcgcgacgcgatcgacgcgttgctgcgcaccgcgcagcccgtgctg
aaccagcgctcgcacaagccggatgcagtcgcggacgcactcgctgcgtggtccgcgcat
ttcgcacggggcaatgcgcaggccgcgcttccgaaagccgcgctcaagctgacgcgcacc
gcgctcgtgaaagcgacgaagaaaggcggcgcaacgcccgaacacgcgttcttcgacgtg
gccgatgcgctcgaagcggcagtggccgcggccgaggccgcgcagcgcgggcgctggctc
gcactgatcgccgagtggctcgacacggcaccggccgagctggccgagcgcaagcgcacg
cgtcgaatcgtgtcgttcgacgacctgctcgcgaatctgtaccacgcactgcatgcgcat
ccgtggctcgccgacacgctgcgcgcacgctatcctgccgcactgatcgacgaatttcag
gataccgacccgctgcagttcgcgatcttcgaccggatcttcgcgccgggcggcccgctc
tttctcgtcggcgatccgaagcaggcgatctacagtttccgtgcagcggatctgcacacc
tatctcgctgcgcgcgcaagcgcgagcgcgtgctacacgctcgccgtcaaccagcgctcg
acgcctgcgatcgtcgatgcgtgcaaccgcttcttcatgtcgaacccgcgcgcgttcgtg
ctcgacgggctcgactactacgcggtgcgggcgggcacgcgcgtgcgtccgccgtttgtc
gacgagaccgattccgggccgggcggcgatttccggatctggtcgctgccgggcggcgac
ggcacgctgctcaagcgcgacgcgcaggcgcaggccgcgcaggcatgtgctgccgagatc
gcgcgcctgatgcgcggcgcacgcgaagggcatgcgcggctcggcgacacgccgttgtcg
ccgggcgatatcgcggtgctggtgcagacgcaccggcagggcagcctcgtgaagcgtgtg
ctcgccacgtggggaatcggcagcgtcgaactcgcgcaggcatcggtgttttcgaccggc
gacgcggagcagctcgagcgcgtgctggcggcgatcgacgcgccgggcgatctgcggcgg
ctgcgcgcagcactcgcggccgactggttcggcctggacgctggcgcgctgtggcgcatg
gagcagggcgacggcgacgcgtcgcgcgaagcggcagacagtgcggatgcgatgagctgg
gtcgagcgcttctcgcgctatcgactgctgtggcgcgaacggggttttgcggtgatgtgg
cgcacgttcacgcgagagctgcggatcgccgaacgtctgatggccggtgcagacggcgag
cgtcgcgtgaccgacatcaaccatctggccgaactgacgcaggcacgcgcgtccgcgcag
ccgggcatcgcgccgacgctgcgctggcttgccgcgcaacggctcgacggcggcggcgag
gaagcccagctgcgtctcgaatccgatcgcaacctcgtgcagatcgtgaccgtgcacaag
tcgaagggcctcgaatacgcggtcgtcttctgtccgttcctgaacgatggcgcgttgcgc
gagccgcccgcgtcggggttgcccgacgcgcgcgaatatcacgacgatgcgggcgatgcg
gtcctgcattacggctgcgacgacgcagccgccgagcatgcagcgcgtcaggcattgcgg
gagcaggcggcggagcgcgcgcggctcgtctacgtggcgctcacgcgtgcggtctatcgg
tgctatctcgtcgccgggccgtatctgtcgtcgcgctcgacccgcgaggcgcggcgcagc
gtgctgaactggctcgtcgctggcgccggccagacgttcgacgcgtggctcgacgagccg
cccgacgaagcggtgctggacgcggcgtggcaagcgctggccggcgggccggtgagcgtc
gcgccgttgccggtgccggtgcgccgcgaacggcttgcggccggccacgatgcgtcgcag
acgctcgcggcgcgccatgcgacacgtgtgctgcgcgatgcgtggcggatggcgagcttc
agttcgctgaccgcgtcgatggcgcgcgaggaggcgggcgtcgcggtcgtgccggacgac
gaattgcgtcccgatcacgatgcgctcgcggcggtgacgcctgacggtgcgttcgcgctg
gaagatgcggttgcgaccgagccgcccgacgacgacatcctcgtgttcccgcgcggcgcg
gcggcaggcgagtgcctgcaccgcctgttcgagctcagccggtttgcggagcccgattcc
tggcatcaggccgcgctcggtgcactgcatgaccggccggtcgaggccgagcccgaactc
gccgcgcggctgcccgcgatgatggcgcggctcgtcggcgacgtcgtgcaaacggaactc
gtgccgggcatgcggcttgcggatctcgatcccgcgaagcgtctcgacgaaatggggttc
ctgtttccggcgccgtcgctggatctgggcgcgctgcgccggctgctggtcgcgtacggc
tatcccgacgttgcgctggacgcgggcatgctcgccggtttcatcaagggtttcatcgac
atgatcgtcgaacatgacggacggttctggatcgtcgactggaagtcgaaccacctcggc
aatacgcccgatgcgtacggcccgcgcgcgctcgacgtcgcgatggccgatcatgcgtat
cacttgcaggcactgctttatacggtcgcgctgcatcgctatctgcgcgggcgattgccc
ggctacgactacgacgcgcacatcgcgggctacctgtatctgttcgttcgcggtgtgcgg
cccgactggcgcagcggcggcgagccggccggcgtgcacgcgcggcggcccgcgcgcgaa
ctcgtcgacgcgctcgacaggatgatggaagggggccgcgcatga
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