Bifidobacterium choerinum: BcFMB_04970
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Entry
BcFMB_04970 CDS
T05748
Name
(GenBank) NagC family transcriptional regulator
Organism
bcho
Bifidobacterium choerinum
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Gene cluster
GFIT
Motif
Pfam:
ROK
HTH_IclR
MarR_2
HTH_Crp_2
HTH_26
Motif
Other DBs
NCBI-ProteinID:
ATU20377
UniProt:
A0A087AIB3
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Position
1274229..1275452
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AA seq
407 aa
AA seq
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MATLRSINQNDLRNHNLSVVLETMMRRTTPLSRADLAKETGLTKATMSLLVSLLIDNRIV
REGMPIVQSVYGRPSTPLLVAGGAMCGIGIQINTDGYGYLVLDLDGSVVAERWVEGDLHG
ADTKAVFDDLDVMLRAQERTLRKHGYTIAGAGLALPGLVTEEGHLIVARNLGWEDVDLNE
QALMRRLDVIAGNESNMAAVAQLPGYATQRADEGVVGPNGSFLYISTDIGIGGAVVRGGS
LVHGDRGFAGEVGHISVQMDGPLCRCGRRGCVEAYAGRRAIVEAAGIAHGADAASQESVD
EFFRRAQAGDARVLEVMDRAMRAIESMIVSIVNVSDLDVVVLGGAWAQLDDARLRAMERH
VQDRILARDVVHVRVSRAGGGARPALLGAAVTGLRRFVDEPLAYLKS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcgacattgaggagcatcaaccagaacgatctgaggaaccacaacctgtccgtcgtg
ctcgagacgatgatgcgccgcacgacgccgctcagccgcgccgacctcgccaaggagacc
gggctgacgaaggcgacgatgtcattgctcgtctcgctgctcatcgacaaccgcatcgtg
cgcgaggggatgccgatcgtgcagtccgtctacggacggccgagcacgccgctgctcgtc
gccggcggcgcgatgtgcggcatcggcatccagatcaacaccgacggctacggctacctc
gtcctcgacctcgacggctccgtcgtcgccgaacgctgggtcgagggcgacctgcacggc
gcggacacgaaggccgtcttcgacgacctcgacgtgatgctgcgcgcgcaggagcggacg
ttgcgcaagcacggctacacgatcgccggcgccggactcgcgctgcccggcctcgtcacc
gaggaaggccacctcatcgtcgcgcgcaacctcggatgggaggacgtcgacctcaacgag
caggcactgatgcgcaggctcgacgtcatcgccggcaacgaatcgaacatggccgccgtc
gcgcagctgcccggctacgcgacgcagcgcgccgacgaaggcgtcgtcgggccgaacgga
tcgttcctctacatctccaccgacatcggcatcggcggcgccgtcgtgcgcggcggctcg
ctcgtacacggcgaccgcggcttcgccggcgaggtcggccacatctccgtgcagatggac
ggaccgctctgccgctgcgggcgccgcggctgcgtcgaggcctatgcgggacgccgcgcg
atcgtcgaggccgccggcatcgcgcatggcgccgatgccgcgagccaggagtcggtcgac
gagttcttccggcgcgcccaggccggcgatgcacgggtgctcgaggtcatggaccgtgcg
atgcgcgcgatcgaatcgatgatcgtctcgatcgtcaacgtcagcgacctcgatgtcgtc
gtcctcggcggcgcatgggcacagctcgacgacgcacggctgcgcgcgatggaacgccat
gtgcaggatcgcatcctcgcgcgcgacgtcgtccatgtgcgcgtctcgcgcgccggcggc
ggcgcgcggccggcgctgctcggcgccgccgtcaccggtctgcgccgcttcgtcgacgag
cctctcgcatacctcaagtcgtga
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